Gene Meso_2801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2801 
Symbol 
ID4179680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3048307 
End bp3049182 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content61% 
IMG OID638068689 
ProductTPR repeat-containing protein 
Protein accessionYP_675342 
Protein GI110635134 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.462521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAG GTGTAATGGC GCAGAACGCA ACCCATTCCC GAGTGCGAAC GGCTCTGGTG 
TTCGTTGCTC TGATGAGCTT GGCAGCTTGC AACACGACCG ATCCCGTGAC GGACCTGACA
CGCATCGACA CCGCGCAGGG ATCGGAGGAA AACATCGCCT CGCTCAGCGC CGTCATCGAG
CGTACGCCAA ACGACCCCGA AGCTTATAAT ATCCGCGGCG CTGCCTATGG GCGGGGCGGC
AATTACCGCG AGGCGCTCAA GGATTTTGAC AGGGCAATTC AGCTCGACCC GCGCTCCTTC
CGGGCTTATG CGAACCGGGC GCTGATCTAT CGTTACATGG GCGATCAGCA GCGGGCGCTA
GCGGATTACA ACCAGGCGAT CGCCCTTAAC GCCAGCTACG ACGTCGCCTA TATCGGCAGG
GGCGAACTTT ACCGCCTCGC CGGGCGCTCC ACGGAAGCCT TCCAGGATTT TGAAAAGGCG
ATCCAACTCG ATACCACGGA CCCGCGCGCA TACCATCGCC GCGGCCTTCT CTATCAAGCA
AGCGGCCAGC ATCAATATGC GATCGAGGAT TTCGCCAAGG CGATCTCCCT CGCCCCCGAT
CAGCCCTATG GCTACAATGG CCGCGGCCTT TCTTATCTCG CCCTGGGCGA TGACGAGAAT
GCCTTCACGG ATTTCAACAC CGCCATCCGT TTGAATGAAC AGCTGGCGGA AAGCTGGGCA
AATCAGGCGC TCGTCTACGA GAAGCGCGGC GAAATGGATA AGGCGGCACG CTCTTATGCG
CGCGCTTTGA GCCTCGATGC CAACTACACA CCGGCCCGCG ACGGCGTCGC AAGAACGCAA
GGTGCGGGCG GCGCGGCGAC GGCATCCAGG ACCTGA
 
Protein sequence
MAEGVMAQNA THSRVRTALV FVALMSLAAC NTTDPVTDLT RIDTAQGSEE NIASLSAVIE 
RTPNDPEAYN IRGAAYGRGG NYREALKDFD RAIQLDPRSF RAYANRALIY RYMGDQQRAL
ADYNQAIALN ASYDVAYIGR GELYRLAGRS TEAFQDFEKA IQLDTTDPRA YHRRGLLYQA
SGQHQYAIED FAKAISLAPD QPYGYNGRGL SYLALGDDEN AFTDFNTAIR LNEQLAESWA
NQALVYEKRG EMDKAARSYA RALSLDANYT PARDGVARTQ GAGGAATASR T