Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_2619 |
Symbol | |
ID | 4179969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 2825277 |
End bp | 2826494 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638068508 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_675162 |
Protein GI | 110634954 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCAAAC GCTTCATCAT CGCTTTCGTG CTCGTCGCCT TGGTTGCAGG AGCACTTGTT GGCTTCAATA TCTTTCGCGA TCGCGCGATC CAGCAGATTT TCGCGACGAT GCAGGCGCCG ACATTGACGG TGTCCACCTC AACGGTGGAG CCATCCACCT GGAGGCCCAG TATCGAGGCG ATCGGTACGA TGGCGGCCGC CAATGGCGTG GATCTCACCG TCGAGACGAA CGGTATCGTC GAGGAAATCC TGTTCAAGGC GAATGACCGC GTAAATGCCG GCGACGTTCT CATGCGGCTG GACGATGAGG CGCAGAAGGC AGATCTCGCC GCCGCGCAAA CCCAAGCAGC CTTGGATCAG CAGACATTGG AGCGCGCCCG CGCCCTACAG CAGCGTGGCG TTGGCTCCCA ATCAAGCCTC GACGAGGCAG AAGCGGCCGC CGCAGCTTCC GCCGCGCGCG TGCAAAGCCT GCAGGCGGCA TTGAACCAGA AGGTGCTGAT CGCACCTTTC AATGGCACGA TCGGCATTCC TCGGATCGAC CTTGGTCAGT ATCTGACGCC GGGCACCACG GTCACCACGC TGCAGGATCT GGAAACGATG CGGGTGGATT TCACGGTTCC CGAGCAGCGC TTCGAAGAAC TTAAGATCGG GCAGCCGGTG AGGCTTGGAT TGACCGAGGA TGACATGCCT TTTGCGGGCA AGGTCATCGG CATCGATCCG AAAATCGATC CCTCCACGCG CCTTGTTTCG GTGCGAGCGG AGGTCACAAA CCCTGAGGGC AGGCTCAATC CAGGCCAATT CGTGCGGGTG AGGGTCGAGC TTCCGGCAGA AGAAAATATC ATTGCCGTTC CGCAAACCGC CTTGGTGACA AGCCTTTATG GCGACTACGT GTACCGGCTT CGTCCGGCGG AAAATCAGAA TACGGAAGGG TCTGCCAATC AGACCCCCGC GGCAGGGCAG CAGCAGGAAG GAGCGGCGGA GAATACCGGT GCAAATTCCG GCGAAGCGGG CGGCCAAGCC GGTGAAAGCG AGATCTTCGT TATTGACCAG GTCTTCGTCA AAACCGGGCG CCGCGCCAAC GGCTCCGTCG AGATTGCCGA AGGTCTCAAC GCCGGAGACG TAGTGGTAAA TGCAGGTCAG AACCGTTTGA CGAACGGCGC ACGGGTCACG ATCGACAACA CGGTGCAGCC CATGCAGATC GGGAGCAGCA ACCAATGA
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Protein sequence | MVKRFIIAFV LVALVAGALV GFNIFRDRAI QQIFATMQAP TLTVSTSTVE PSTWRPSIEA IGTMAAANGV DLTVETNGIV EEILFKANDR VNAGDVLMRL DDEAQKADLA AAQTQAALDQ QTLERARALQ QRGVGSQSSL DEAEAAAAAS AARVQSLQAA LNQKVLIAPF NGTIGIPRID LGQYLTPGTT VTTLQDLETM RVDFTVPEQR FEELKIGQPV RLGLTEDDMP FAGKVIGIDP KIDPSTRLVS VRAEVTNPEG RLNPGQFVRV RVELPAEENI IAVPQTALVT SLYGDYVYRL RPAENQNTEG SANQTPAAGQ QQEGAAENTG ANSGEAGGQA GESEIFVIDQ VFVKTGRRAN GSVEIAEGLN AGDVVVNAGQ NRLTNGARVT IDNTVQPMQI GSSNQ
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