Gene Meso_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2600 
Symbol 
ID4179956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp2806391 
End bp2807725 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content58% 
IMG OID638068495 
ProductHlyD family type I secretion membrane fusion protein 
Protein accessionYP_675149 
Protein GI110634941 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID[TIGR01843] type I secretion membrane fusion protein, HlyD family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATA TCGCAAAAGT CCATGACATC GAGTGGTTTT CGGAGGTCCC ACGCTCCATC 
AGGAAGCAGA CGACCTTCGG CATTATCCTG CTTGGCGTCA CCTTCGGCGG CTTCGGCGGC
TGGGCGCTTA CCGCCCCACT TGCGGCGGCA GTGATCGCGC AGGGCAGCTT CGTCGCCACT
GGGCAGAATA AGATCGTGCA GCATTTCGAG GGCGGGATCA TCAAGGAAAT CCTGGTGAAC
GAAGGGGATC AGGTGAAGTC CGACCAGCCG CTCATCTTGC TCGACGAAAC GGCCGCCCTC
GCGAAGGAGC GGGAGCTGTT CCTGCGTCAA GTACGGCTGG AGGCCATATC CGCGCGCCTC
TACGCTCAGC TGGGAGGCAA GGATGAAATC GAACTTCCTG CGATCCTTGC GGACAACAGG
ATGGATCCCG AAGTAGCCCC CATCCTGGAG GCCCAAAAAC TCAATTTCGA AGCATGGAAA
ACAAAGCTCG GGAGCGAAGT CGCGCTTGTG GAGCAGAATA TCATGGCGCT GGGCTATCGG
GCCGAGGGGT ACGCGAAGCA GCGGGAAGCG ACGATTATTC AACTCGGTCT GTTAAAGGAG
GAAGCTGAGG GGAAAGAGGT TCTGCTAAAG CAGGGGCTTA TCCGCAAAAC TGAGATGAAG
GCCATTCAGC GCGCAATTGC GGAAGCCGAG GGCGAGATCG CGCGCCTTGC GGCCGAGGTC
TCGGAAACGC ATTCCCAGGT GAATAAAGAG GAACAGCAGA TCATCCAAAC GAAAACGGCC
TATCGAGAAG CGGTACTCGA TGAATTGCAG AGGATTCAAG CAGAGCTCGA TTCCGTGCGC
GAGCAGTCGC GGGCAGCTAA AAACGTTCTC CAGCGGGCAA CGATCAACGC GCCAGTCACG
GGCACCGTGG TGCGCCTCAA CTATCATACA TCGGGCGGGG TCATCGAAAG CGGCAAGGGA
ATCATGGAAA TCCTGCCCTC GGACGCACCC CTCATTATCG AAGCGCATGT GCCCCGAAAC
GAGATCGATG ATGTGAAGGT GGGCCAGGAA GCAACCATAC GCCTGATTTC ACTCAATCAG
CGCACCACGC CCGTCCTCAA TGGCGAGGTT TTCTATATAT CCGCTGACGC CCTCAAAGGC
GAGCCGAACG CCCCGCAGGA CTTCTATCTG GCACGCATCC GCCTTCCTGC AACTGAGATT
GCACGGGTAT CCGGCTTCAC CCCGACTCCG GGCATGCCGG CCGAAATCCT TATCCAGACG
GCGGAACGGA CATTCTTCAG CTATCTGACG AAGCCGATCA CGGACAGCAT GTCGCGCGCC
TTCACGGAGC ACTAG
 
Protein sequence
MSDIAKVHDI EWFSEVPRSI RKQTTFGIIL LGVTFGGFGG WALTAPLAAA VIAQGSFVAT 
GQNKIVQHFE GGIIKEILVN EGDQVKSDQP LILLDETAAL AKERELFLRQ VRLEAISARL
YAQLGGKDEI ELPAILADNR MDPEVAPILE AQKLNFEAWK TKLGSEVALV EQNIMALGYR
AEGYAKQREA TIIQLGLLKE EAEGKEVLLK QGLIRKTEMK AIQRAIAEAE GEIARLAAEV
SETHSQVNKE EQQIIQTKTA YREAVLDELQ RIQAELDSVR EQSRAAKNVL QRATINAPVT
GTVVRLNYHT SGGVIESGKG IMEILPSDAP LIIEAHVPRN EIDDVKVGQE ATIRLISLNQ
RTTPVLNGEV FYISADALKG EPNAPQDFYL ARIRLPATEI ARVSGFTPTP GMPAEILIQT
AERTFFSYLT KPITDSMSRA FTEH