Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_2600 |
Symbol | |
ID | 4179956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 2806391 |
End bp | 2807725 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638068495 |
Product | HlyD family type I secretion membrane fusion protein |
Protein accession | YP_675149 |
Protein GI | 110634941 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGATA TCGCAAAAGT CCATGACATC GAGTGGTTTT CGGAGGTCCC ACGCTCCATC AGGAAGCAGA CGACCTTCGG CATTATCCTG CTTGGCGTCA CCTTCGGCGG CTTCGGCGGC TGGGCGCTTA CCGCCCCACT TGCGGCGGCA GTGATCGCGC AGGGCAGCTT CGTCGCCACT GGGCAGAATA AGATCGTGCA GCATTTCGAG GGCGGGATCA TCAAGGAAAT CCTGGTGAAC GAAGGGGATC AGGTGAAGTC CGACCAGCCG CTCATCTTGC TCGACGAAAC GGCCGCCCTC GCGAAGGAGC GGGAGCTGTT CCTGCGTCAA GTACGGCTGG AGGCCATATC CGCGCGCCTC TACGCTCAGC TGGGAGGCAA GGATGAAATC GAACTTCCTG CGATCCTTGC GGACAACAGG ATGGATCCCG AAGTAGCCCC CATCCTGGAG GCCCAAAAAC TCAATTTCGA AGCATGGAAA ACAAAGCTCG GGAGCGAAGT CGCGCTTGTG GAGCAGAATA TCATGGCGCT GGGCTATCGG GCCGAGGGGT ACGCGAAGCA GCGGGAAGCG ACGATTATTC AACTCGGTCT GTTAAAGGAG GAAGCTGAGG GGAAAGAGGT TCTGCTAAAG CAGGGGCTTA TCCGCAAAAC TGAGATGAAG GCCATTCAGC GCGCAATTGC GGAAGCCGAG GGCGAGATCG CGCGCCTTGC GGCCGAGGTC TCGGAAACGC ATTCCCAGGT GAATAAAGAG GAACAGCAGA TCATCCAAAC GAAAACGGCC TATCGAGAAG CGGTACTCGA TGAATTGCAG AGGATTCAAG CAGAGCTCGA TTCCGTGCGC GAGCAGTCGC GGGCAGCTAA AAACGTTCTC CAGCGGGCAA CGATCAACGC GCCAGTCACG GGCACCGTGG TGCGCCTCAA CTATCATACA TCGGGCGGGG TCATCGAAAG CGGCAAGGGA ATCATGGAAA TCCTGCCCTC GGACGCACCC CTCATTATCG AAGCGCATGT GCCCCGAAAC GAGATCGATG ATGTGAAGGT GGGCCAGGAA GCAACCATAC GCCTGATTTC ACTCAATCAG CGCACCACGC CCGTCCTCAA TGGCGAGGTT TTCTATATAT CCGCTGACGC CCTCAAAGGC GAGCCGAACG CCCCGCAGGA CTTCTATCTG GCACGCATCC GCCTTCCTGC AACTGAGATT GCACGGGTAT CCGGCTTCAC CCCGACTCCG GGCATGCCGG CCGAAATCCT TATCCAGACG GCGGAACGGA CATTCTTCAG CTATCTGACG AAGCCGATCA CGGACAGCAT GTCGCGCGCC TTCACGGAGC ACTAG
|
Protein sequence | MSDIAKVHDI EWFSEVPRSI RKQTTFGIIL LGVTFGGFGG WALTAPLAAA VIAQGSFVAT GQNKIVQHFE GGIIKEILVN EGDQVKSDQP LILLDETAAL AKERELFLRQ VRLEAISARL YAQLGGKDEI ELPAILADNR MDPEVAPILE AQKLNFEAWK TKLGSEVALV EQNIMALGYR AEGYAKQREA TIIQLGLLKE EAEGKEVLLK QGLIRKTEMK AIQRAIAEAE GEIARLAAEV SETHSQVNKE EQQIIQTKTA YREAVLDELQ RIQAELDSVR EQSRAAKNVL QRATINAPVT GTVVRLNYHT SGGVIESGKG IMEILPSDAP LIIEAHVPRN EIDDVKVGQE ATIRLISLNQ RTTPVLNGEV FYISADALKG EPNAPQDFYL ARIRLPATEI ARVSGFTPTP GMPAEILIQT AERTFFSYLT KPITDSMSRA FTEH
|
| |