Gene Meso_2312 details

Gene Information

• Locus tag: Meso_2312
• ID: 4180843
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: +
• Start bp: 2467366
• End bp: 2467968
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 638068205
• Product: autoinducer synthesis protein
• Protein accession: YP_674865
• Protein GI: 110634657
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism; [T] Signal transduction mechanisms
• COG ID: [COG3916] N-acyl-L-homoserine lactone synthetase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.362295
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTCTTA TCATAAACTC ACAGAACGCC CATCGTCACC GCAAGGAAAT GGATGAGGCC 
TTCCGCCTGC GCCACAGGAT CTTTGTCGAA GAAAAGGGTT GGACGGATCT TCGCAGCGAC 
CATGGCCGCG AGACGGATCA CTTTGACGAC GAGCACGCGG TTCACATGCT CTACATCACC 
GATGAACGCG TCGTCGGCTA TCAGCGCATG TTGCCGACAA CACGGCCTCA TATCCTCTCG 
GAGGTGCTCC CTGAACTGTG CGAAAGCGAG CGACCAGCCG GACCTGAAAT CTGGGAATGG 
ACACGTTACT GCGTCGAGCC AGGCTACCGC GAGCGGGGCC GGATGCTGAG CCCGGTGGCG 
AATGCTCTTC TTTCCGGGAT TGTCGAATGG GGGCTCGAGA CGGGCGTTTC GACGATCCTG 
ATCGAGATGA ACCCGCTCTG GCTGCTGCGT CTTGTTCAAC TTCATTTCAG AGTCGTGCCG 
CTTGGAATTC CCAGACCGAT CGGCGGCGAG GAAACGCTTG CGGTAGCCGC GAGCTTCGAC 
CGTCGCACTC TTGCGCGGCT GCGGGAAATG CGGAACTCCG GCAAGCCCGC GTCCGCGTCA 
TGA 

 

Protein sequence

MLLIINSQNA HRHRKEMDEA FRLRHRIFVE EKGWTDLRSD HGRETDHFDD EHAVHMLYIT 
DERVVGYQRM LPTTRPHILS EVLPELCESE RPAGPEIWEW TRYCVEPGYR ERGRMLSPVA 
NALLSGIVEW GLETGVSTIL IEMNPLWLLR LVQLHFRVVP LGIPRPIGGE ETLAVAASFD 
RRTLARLREM RNSGKPASAS