| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1947 |
|---|
| Symbol | |
|---|
| ID | 4182514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 2087293 |
|---|
| End bp | 2088198 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638067843 |
|---|
| Product | 5-dehydro-4-deoxyglucarate dehydratase |
|---|
| Protein accession | YP_674505 |
|---|
| Protein GI | 110634297 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.357262 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCCC AGGATCTCAA GACGGTGCTC GGAGCGGGAC TGCTCTCCTT TCCGGTCACC
CCTTTCGGAC CCGACGGCGG GTTCAACGAA GCCGTCTATC GCGAGCATGT CGGCTGGCTC
GCCAGCTTCG AGGCTGCCGC GCTGTTTGCC GCGGGCGGTA CCGGCGAATT CTTCTCGCTG
GCCCCCGATG AAATCCCCGC CATCGTGCGC GCCGCCAAGG CGGCGGCGGG CAATACCCCG
ATCATTTCGG GCTGCGGCCA TGGCACCGAG GTCGCCATCT CTATCGCCAA GGCGGCCGAA
AAGGCCGGCG CCGACGGCAT CCTGCTCCTG CCGCATTACC TGATAGACGC ACCCCAGGCC
GGCCTCTACA ACCACATCAA GCGCGTCTGC GACTCCATAG GCATCGGTGT CATGGTCTAT
AACCGTGACA ATTCGATCCT GCAGGCCGAT ACGCTCAAGC GCCTCTGCGA CGTCTGCCCC
AATCTCGTCG GCTTCAAGGA CGGATCGGGC GAACTCGGCT TGGTCCGGCA GATCTCCGCC
ACCATGGGGG ACCGCCTCAC CTATCTGGGC GGCATGCCCA CCGCGGAATT GTTCGCCGAG
GCCTATCTGG CGGCCGGCTT CACCACCTAT TCCTCGGCCG TGTTCAATTT CGTCCCGGAG
CTGGCCGTCC GCTTCTATAA GGCCCTGCGC GCCGGCCGCC GTGCCGAATG CGAGACGCTC
CTCAAGGATT TCTTCTATCC ATTCATGGCC ATACGCAATC GCAGCAAGGG CTATGCCGTG
GCCGCGATCA AGGCGGGCGT GCGCCTGCGC GGCTATGATG CAGGCCCGGT CCGCTCGCCG
CTCGTCGATC TCACGTCCGA AGAGATGGAT ATGATGGCCT CATTGATGGC TTCGGTCGAC
CGATGA
|
|---|
| Protein sequence | MEPQDLKTVL GAGLLSFPVT PFGPDGGFNE AVYREHVGWL ASFEAAALFA AGGTGEFFSL
APDEIPAIVR AAKAAAGNTP IISGCGHGTE VAISIAKAAE KAGADGILLL PHYLIDAPQA
GLYNHIKRVC DSIGIGVMVY NRDNSILQAD TLKRLCDVCP NLVGFKDGSG ELGLVRQISA
TMGDRLTYLG GMPTAELFAE AYLAAGFTTY SSAVFNFVPE LAVRFYKALR AGRRAECETL
LKDFFYPFMA IRNRSKGYAV AAIKAGVRLR GYDAGPVRSP LVDLTSEEMD MMASLMASVD
R
|
|---|
| |