Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1947 |
Symbol | |
ID | 4182514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 2087293 |
End bp | 2088198 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638067843 |
Product | 5-dehydro-4-deoxyglucarate dehydratase |
Protein accession | YP_674505 |
Protein GI | 110634297 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.357262 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACCCC AGGATCTCAA GACGGTGCTC GGAGCGGGAC TGCTCTCCTT TCCGGTCACC CCTTTCGGAC CCGACGGCGG GTTCAACGAA GCCGTCTATC GCGAGCATGT CGGCTGGCTC GCCAGCTTCG AGGCTGCCGC GCTGTTTGCC GCGGGCGGTA CCGGCGAATT CTTCTCGCTG GCCCCCGATG AAATCCCCGC CATCGTGCGC GCCGCCAAGG CGGCGGCGGG CAATACCCCG ATCATTTCGG GCTGCGGCCA TGGCACCGAG GTCGCCATCT CTATCGCCAA GGCGGCCGAA AAGGCCGGCG CCGACGGCAT CCTGCTCCTG CCGCATTACC TGATAGACGC ACCCCAGGCC GGCCTCTACA ACCACATCAA GCGCGTCTGC GACTCCATAG GCATCGGTGT CATGGTCTAT AACCGTGACA ATTCGATCCT GCAGGCCGAT ACGCTCAAGC GCCTCTGCGA CGTCTGCCCC AATCTCGTCG GCTTCAAGGA CGGATCGGGC GAACTCGGCT TGGTCCGGCA GATCTCCGCC ACCATGGGGG ACCGCCTCAC CTATCTGGGC GGCATGCCCA CCGCGGAATT GTTCGCCGAG GCCTATCTGG CGGCCGGCTT CACCACCTAT TCCTCGGCCG TGTTCAATTT CGTCCCGGAG CTGGCCGTCC GCTTCTATAA GGCCCTGCGC GCCGGCCGCC GTGCCGAATG CGAGACGCTC CTCAAGGATT TCTTCTATCC ATTCATGGCC ATACGCAATC GCAGCAAGGG CTATGCCGTG GCCGCGATCA AGGCGGGCGT GCGCCTGCGC GGCTATGATG CAGGCCCGGT CCGCTCGCCG CTCGTCGATC TCACGTCCGA AGAGATGGAT ATGATGGCCT CATTGATGGC TTCGGTCGAC CGATGA
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Protein sequence | MEPQDLKTVL GAGLLSFPVT PFGPDGGFNE AVYREHVGWL ASFEAAALFA AGGTGEFFSL APDEIPAIVR AAKAAAGNTP IISGCGHGTE VAISIAKAAE KAGADGILLL PHYLIDAPQA GLYNHIKRVC DSIGIGVMVY NRDNSILQAD TLKRLCDVCP NLVGFKDGSG ELGLVRQISA TMGDRLTYLG GMPTAELFAE AYLAAGFTTY SSAVFNFVPE LAVRFYKALR AGRRAECETL LKDFFYPFMA IRNRSKGYAV AAIKAGVRLR GYDAGPVRSP LVDLTSEEMD MMASLMASVD R
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