Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1840 |
Symbol | |
ID | 4182141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 1976101 |
End bp | 1977477 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638067733 |
Product | MATE efflux family protein |
Protein accession | YP_674398 |
Protein GI | 110634190 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.308247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATTG ACCAGCCACG GCTTGACCAG GAATCTTCCC CTGGTTCGCA GATGCCTGCC ACCACCGTTA CCCATGGCCA GGTGCTGAAG ATTGCGTTGC CAATCACCCT GGCATCGATA TCGACACCCC TGGTCGGCAT CGTTGACACT GCAGTTGTCG GGCAGTTGGG GAACGAAGCC CTGATCGGCG GCATCGCTGC CGCCAACGTG ATCATCAACC TCGTCTTCTT CACCTTCAAC TTCCTGCGTT CCTCCACCAC TGCCATGGTT TCGCAAGCGT TCGGGGCGGG ACACGGGATA GAGATGCTCG CGCATGCGCT CCGCGCCATA TGCTTGGCTT TCGCGGCAGG CCTCATCGCA GTGGCGCTAC AGTGGCCGAT TGCCTATGCC GGCTTTTCCC TGCTCGGCGT CGGCGAGGAT GTAAGGGCAG CCGGAATGGT CTATTTCGGC ATCCGCGTCT GGTCAGCGCC GCTGCTGCTC GTCAATTATG CGCTGGTGGG CTGGCTCTTC GGCCAGGGCT CTTTCCTGCC GGGCCTTGCC CTCCAGGCAG TGCTCAACCT CGTCAACGCA ATACTCAGTA TCGCTTTCGT CCTCCATTTC GATTGGGGTG TTGCCGGCGC GGCGCTGGCG ACGGTGGCCG CAGAGACGGC CACCGCTCTC GCCGGCGGCA TTCTGATAGC GCGCGCTCTT CATGGAAAGG CACGGGCAGT GCTTTCAGCC CTGCCGGACA TGCGCCAACT GAAGCGGATA CTCAGCATCA ATGCAGACAT TCTTCTGCGA TCCATGATTC GCTTTTTCAG CATCGCTCTC TTCACGCGGG AGAGTGCCGC TTTTGGCACG GCGATGCTCG CAGCCAACGT CGTGCTGATG AACCTCTTCT ATTTTTCCGG CGCGATGATC CAGGGGCTTG CCGTCGCCGC CCAGCACCTT GCCGGAAGGG CGGTGGGCGG GTGTGACCGC GTCATGTTCG AAACATCGGT AAACCTCTCC GTCTTCTGGA GCGTTGCGAC GGGCTTTGCT GTGGCGGCGG TCTATCTCAT CGTTCAAGAC CCGATCATCG CGCTCATGAC GGCAAGTCCT GATGTACGTG CGCTCGCTCA CGCCTATTTT CACTGGGCGC TACTGACTGC CCCGCTCGGC AGTCTTGCCT TCGTCATGGA TGGCGTCTTC ATAGGTGCGA CCTGGGCGCG CGACATCCGC AACATGATGC TCGTCGCTTC GGCCTGCTAC CTGCTGCTCA TCTTCACCCT TATCCCCTGG CTCGGCAACG ATGGACTATG GATCGCCTTC CTCGCGTTCC TCGCCGTGCG CGGTTTCACG CTTCGTTGGC GCATGAACCG GCTGATGTCA CGCACCTTTC CGCTCCCCTC CCGATAG
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Protein sequence | MTIDQPRLDQ ESSPGSQMPA TTVTHGQVLK IALPITLASI STPLVGIVDT AVVGQLGNEA LIGGIAAANV IINLVFFTFN FLRSSTTAMV SQAFGAGHGI EMLAHALRAI CLAFAAGLIA VALQWPIAYA GFSLLGVGED VRAAGMVYFG IRVWSAPLLL VNYALVGWLF GQGSFLPGLA LQAVLNLVNA ILSIAFVLHF DWGVAGAALA TVAAETATAL AGGILIARAL HGKARAVLSA LPDMRQLKRI LSINADILLR SMIRFFSIAL FTRESAAFGT AMLAANVVLM NLFYFSGAMI QGLAVAAQHL AGRAVGGCDR VMFETSVNLS VFWSVATGFA VAAVYLIVQD PIIALMTASP DVRALAHAYF HWALLTAPLG SLAFVMDGVF IGATWARDIR NMMLVASACY LLLIFTLIPW LGNDGLWIAF LAFLAVRGFT LRWRMNRLMS RTFPLPSR
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