Gene Meso_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1840 
Symbol 
ID4182141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1976101 
End bp1977477 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content61% 
IMG OID638067733 
ProductMATE efflux family protein 
Protein accessionYP_674398 
Protein GI110634190 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.308247 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATTG ACCAGCCACG GCTTGACCAG GAATCTTCCC CTGGTTCGCA GATGCCTGCC 
ACCACCGTTA CCCATGGCCA GGTGCTGAAG ATTGCGTTGC CAATCACCCT GGCATCGATA
TCGACACCCC TGGTCGGCAT CGTTGACACT GCAGTTGTCG GGCAGTTGGG GAACGAAGCC
CTGATCGGCG GCATCGCTGC CGCCAACGTG ATCATCAACC TCGTCTTCTT CACCTTCAAC
TTCCTGCGTT CCTCCACCAC TGCCATGGTT TCGCAAGCGT TCGGGGCGGG ACACGGGATA
GAGATGCTCG CGCATGCGCT CCGCGCCATA TGCTTGGCTT TCGCGGCAGG CCTCATCGCA
GTGGCGCTAC AGTGGCCGAT TGCCTATGCC GGCTTTTCCC TGCTCGGCGT CGGCGAGGAT
GTAAGGGCAG CCGGAATGGT CTATTTCGGC ATCCGCGTCT GGTCAGCGCC GCTGCTGCTC
GTCAATTATG CGCTGGTGGG CTGGCTCTTC GGCCAGGGCT CTTTCCTGCC GGGCCTTGCC
CTCCAGGCAG TGCTCAACCT CGTCAACGCA ATACTCAGTA TCGCTTTCGT CCTCCATTTC
GATTGGGGTG TTGCCGGCGC GGCGCTGGCG ACGGTGGCCG CAGAGACGGC CACCGCTCTC
GCCGGCGGCA TTCTGATAGC GCGCGCTCTT CATGGAAAGG CACGGGCAGT GCTTTCAGCC
CTGCCGGACA TGCGCCAACT GAAGCGGATA CTCAGCATCA ATGCAGACAT TCTTCTGCGA
TCCATGATTC GCTTTTTCAG CATCGCTCTC TTCACGCGGG AGAGTGCCGC TTTTGGCACG
GCGATGCTCG CAGCCAACGT CGTGCTGATG AACCTCTTCT ATTTTTCCGG CGCGATGATC
CAGGGGCTTG CCGTCGCCGC CCAGCACCTT GCCGGAAGGG CGGTGGGCGG GTGTGACCGC
GTCATGTTCG AAACATCGGT AAACCTCTCC GTCTTCTGGA GCGTTGCGAC GGGCTTTGCT
GTGGCGGCGG TCTATCTCAT CGTTCAAGAC CCGATCATCG CGCTCATGAC GGCAAGTCCT
GATGTACGTG CGCTCGCTCA CGCCTATTTT CACTGGGCGC TACTGACTGC CCCGCTCGGC
AGTCTTGCCT TCGTCATGGA TGGCGTCTTC ATAGGTGCGA CCTGGGCGCG CGACATCCGC
AACATGATGC TCGTCGCTTC GGCCTGCTAC CTGCTGCTCA TCTTCACCCT TATCCCCTGG
CTCGGCAACG ATGGACTATG GATCGCCTTC CTCGCGTTCC TCGCCGTGCG CGGTTTCACG
CTTCGTTGGC GCATGAACCG GCTGATGTCA CGCACCTTTC CGCTCCCCTC CCGATAG
 
Protein sequence
MTIDQPRLDQ ESSPGSQMPA TTVTHGQVLK IALPITLASI STPLVGIVDT AVVGQLGNEA 
LIGGIAAANV IINLVFFTFN FLRSSTTAMV SQAFGAGHGI EMLAHALRAI CLAFAAGLIA
VALQWPIAYA GFSLLGVGED VRAAGMVYFG IRVWSAPLLL VNYALVGWLF GQGSFLPGLA
LQAVLNLVNA ILSIAFVLHF DWGVAGAALA TVAAETATAL AGGILIARAL HGKARAVLSA
LPDMRQLKRI LSINADILLR SMIRFFSIAL FTRESAAFGT AMLAANVVLM NLFYFSGAMI
QGLAVAAQHL AGRAVGGCDR VMFETSVNLS VFWSVATGFA VAAVYLIVQD PIIALMTASP
DVRALAHAYF HWALLTAPLG SLAFVMDGVF IGATWARDIR NMMLVASACY LLLIFTLIPW
LGNDGLWIAF LAFLAVRGFT LRWRMNRLMS RTFPLPSR