Gene Meso_1711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1711 
Symbol 
ID4181341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1833893 
End bp1836499 
Gene Length2607 bp 
Protein Length868 aa 
Translation table11 
GC content62% 
IMG OID638067603 
Productribonuclease E 
Protein accessionYP_674271 
Protein GI110634063 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID[TIGR00757] ribonuclease, Rne/Rng family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0296054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAACA AGATGCTGAT AGACGCCTCC CACCCGGAGG AAACCCGCGT TGTTGTCCTG 
CGCGGTAACC GTATCGAAGA GTTCGATTTC GAATCACAAG ATAAGAAGCA ACTCAGAGGA
AACATCTACC TTGCGCGGGT GACACGCGTA GAGCCTTCCC TGCAGGCTGC CTTTGTTGAA
TACGGAGGAA ACCGCCACGG CTTCCTCGCC TTCAGCGAAA TTCATCCTGA TTATTACCAG
ATTCCCGTTG CCGATCGGCA GGCGCTTCTG GAAGCCGAAG CCGAGGAAGC CCGCGCGGCC
GACGAAGCGG AGGAAGGCGA GGCGCAGGCC GGGCGCGGCC GCAAGCGTCG TCGTCGTGAT
GCTAAGACCG ACGAGGTTGT GTCCGAAGGC AAGGATGTGG CGCAGCCGGA AGCTGTCAGG
GACGATACCG TCTCCGAGCC GCTTGCTGCC GATGGCAACG GCTCGGATGA AGCGAACGGA
TCGGATGAGG TCGATACGGT TGGCGCCGAG GACGCGCTTG ATGAAGCGCA GAATCGCCGG
CGCCCCGTGC GTCGCAACTA TAAGATCCAG GAAGTGATCA AGCGCCGGCA AATCATGCTG
GTGCAGGTGG TTAAGGAAGA ACGCGGCAGC AAGGGCGCGG CTCTCACCAC CTATCTGTCG
CTCGCCGGAC GGTATTCCGT GCTGATGCCG AATACCGCGC GCGGCGGCGG CATCTCGCGC
AAGATCACGA ATCTCCAGGA CCGCAAGCGG CTCAAAGAGG TGGTCAAGGG CCTCGATGTA
CCGGAAGGCA TGGGGGTAAT CCTTCGCACG GCCGGTGCCA ATCGCACCAA GGCTGAAATC
AAGCGCGACT ACGAATATCT GATGCGGCTT TGGGAGCGGG TGCGCACTTT GACGCTCGAA
TCCATAGCCC CTGCCCTCGT TTATGAGGAA GGCAGCCTCA TCAAGCGCGC GGTGCGCGAT
CTCTACAACA AGGATATCGA CGAAATCCTG GTGGCCGGTG AAGACGGCTA TCGCGAGGCC
AAGGATTTCA TGCGCATGCT GATGCCGAGC CATGCGAAAG CTGTGCAGCC ATACCGCGAC
AGCGTGCCGA TTTTCGCGCG CAACGGCATC GAAGCTCAGT TGGATAAGAT GCTGCAGCCG
CAGGTGACGC TAAAGTCAGG CGGCTATATC ATCATCAACC AGACTGAAGC CCTTGTCGCC
ATCGACGTAA ACTCCGGCCG CTCGACAAAG GAGCATTCCA TCGAGGACAC CGCCCTCCAG
ACCAATCTGG AGGCGGCGGA AGAGATATCG AGACAGCTTC GCCTGCGCGA TCTTGCGGGA
CTGATCGTCA TCGACTTCAT CGACATGGAG GAGAACCGCA ACAACCGCGC GGTCGAAAAG
CGTCTGAAAG AATGTCTGAA GAGCGACCGC GCCCGGATCC AGGTGGGGCG CATCTCGCAT
TTCGGCCTGC TGGAGATGTC GCGCCAGCGC ATCCGTTCAA GCGTTCTGGA AAGCACAATG
CAGCCCTGCC CCCATTGCGG CGGCACCGGC CATGTGCGTT CCGATTCGTC TGTTGCGCTG
CTCGTGGTGC GCGCCATCGA GGAATATCTG TTGAAGGATG GACGCCACGA TATCACCGTG
CGCACCCCCA CTTCGACGGC TCTCTACCTT CTCAATCACA AGCGCGCGAC GCTCGTCGAG
ATGGAGTCGC GGTTTGGCGT GGAGATCACG ATCGAGACGG ACGAGGAGTT GGGAACCCAG
CACTACGCCA TTGTAAAAGG CCAGCCCTCC ACCCGCGTTC CGGCGTCGAG AGCGGTCGTC
CAGGCCGTGC CGGAAGTCGA GGATGAAGCG GAGGAGGAAA CCTACGTCGA AGAGACGGAG
GAACTGGAGG AGAAGCAGAC GGCAGCCGAG GAGCCGGGCG GTCCTGGCCG CAAGCGGCGC
CGCCGCCGCC GTCGGCGTGG AGGAAAGGAC CGTGCCGCCG AGCAAGCTGC GCCGCATTCC
GCGGTAACAG AGGAAATCTC GGAGCCGGCA GCCGAGACGG GCGAGGCCGA TCTCACCGCC
GCCGAAACGG AAGCGGAGGC GGCAGACGTC GAGGCTGGCG ACGGTGGACC TCGCAAGAAG
CGCCACCGCG GAAAGCGCGG CGGCAAGCGC AATCGCCGGG ACGAGGAAGC CGCACCGGAA
GATGCGGTAA CGGCGCAGTC AGAGGAACCG GCGGGCGAAA TTCAGGCAGA GGCGGCGAGC
GAAGCCGTGT CGAGCGAAGC GGCAGCGGCG ACGAGCGAAG CGGCAGCGGC GGAGGCAGAG
CCTGTTGCGG AGGTTTCCGC CGAAGAAGTG GTGGTGGAAG AGAAACCAGC CAAGAAACCG
CGCCGAAAGA CCCGCGCGAA AAAGGATGCG GCTGCCGACG AGATCGCGCA GCCAGCCCCG
GTGGCGCAGG ACGAAGAACC CGCGCCAGCC GCCCCAACGG TCGAAGCTCT GGTCGAGGAC
AAGCCCGAAG ACAAGCCGTC CAAGCCATCA AGGCGAACCG CTGCCAACAC TTCGGAAAAG
CCAAAACCCG TCGTTACATC TACCGGGGAA AGCGGTGAAG CACCGGCGCG AAAGACCGGG
TGGTGGCAGC GCAAGAGCTT CTTTTAG
 
Protein sequence
MPNKMLIDAS HPEETRVVVL RGNRIEEFDF ESQDKKQLRG NIYLARVTRV EPSLQAAFVE 
YGGNRHGFLA FSEIHPDYYQ IPVADRQALL EAEAEEARAA DEAEEGEAQA GRGRKRRRRD
AKTDEVVSEG KDVAQPEAVR DDTVSEPLAA DGNGSDEANG SDEVDTVGAE DALDEAQNRR
RPVRRNYKIQ EVIKRRQIML VQVVKEERGS KGAALTTYLS LAGRYSVLMP NTARGGGISR
KITNLQDRKR LKEVVKGLDV PEGMGVILRT AGANRTKAEI KRDYEYLMRL WERVRTLTLE
SIAPALVYEE GSLIKRAVRD LYNKDIDEIL VAGEDGYREA KDFMRMLMPS HAKAVQPYRD
SVPIFARNGI EAQLDKMLQP QVTLKSGGYI IINQTEALVA IDVNSGRSTK EHSIEDTALQ
TNLEAAEEIS RQLRLRDLAG LIVIDFIDME ENRNNRAVEK RLKECLKSDR ARIQVGRISH
FGLLEMSRQR IRSSVLESTM QPCPHCGGTG HVRSDSSVAL LVVRAIEEYL LKDGRHDITV
RTPTSTALYL LNHKRATLVE MESRFGVEIT IETDEELGTQ HYAIVKGQPS TRVPASRAVV
QAVPEVEDEA EEETYVEETE ELEEKQTAAE EPGGPGRKRR RRRRRRGGKD RAAEQAAPHS
AVTEEISEPA AETGEADLTA AETEAEAADV EAGDGGPRKK RHRGKRGGKR NRRDEEAAPE
DAVTAQSEEP AGEIQAEAAS EAVSSEAAAA TSEAAAAEAE PVAEVSAEEV VVEEKPAKKP
RRKTRAKKDA AADEIAQPAP VAQDEEPAPA APTVEALVED KPEDKPSKPS RRTAANTSEK
PKPVVTSTGE SGEAPARKTG WWQRKSFF