Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1711 |
Symbol | |
ID | 4181341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 1833893 |
End bp | 1836499 |
Gene Length | 2607 bp |
Protein Length | 868 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638067603 |
Product | ribonuclease E |
Protein accession | YP_674271 |
Protein GI | 110634063 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0296054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAACA AGATGCTGAT AGACGCCTCC CACCCGGAGG AAACCCGCGT TGTTGTCCTG CGCGGTAACC GTATCGAAGA GTTCGATTTC GAATCACAAG ATAAGAAGCA ACTCAGAGGA AACATCTACC TTGCGCGGGT GACACGCGTA GAGCCTTCCC TGCAGGCTGC CTTTGTTGAA TACGGAGGAA ACCGCCACGG CTTCCTCGCC TTCAGCGAAA TTCATCCTGA TTATTACCAG ATTCCCGTTG CCGATCGGCA GGCGCTTCTG GAAGCCGAAG CCGAGGAAGC CCGCGCGGCC GACGAAGCGG AGGAAGGCGA GGCGCAGGCC GGGCGCGGCC GCAAGCGTCG TCGTCGTGAT GCTAAGACCG ACGAGGTTGT GTCCGAAGGC AAGGATGTGG CGCAGCCGGA AGCTGTCAGG GACGATACCG TCTCCGAGCC GCTTGCTGCC GATGGCAACG GCTCGGATGA AGCGAACGGA TCGGATGAGG TCGATACGGT TGGCGCCGAG GACGCGCTTG ATGAAGCGCA GAATCGCCGG CGCCCCGTGC GTCGCAACTA TAAGATCCAG GAAGTGATCA AGCGCCGGCA AATCATGCTG GTGCAGGTGG TTAAGGAAGA ACGCGGCAGC AAGGGCGCGG CTCTCACCAC CTATCTGTCG CTCGCCGGAC GGTATTCCGT GCTGATGCCG AATACCGCGC GCGGCGGCGG CATCTCGCGC AAGATCACGA ATCTCCAGGA CCGCAAGCGG CTCAAAGAGG TGGTCAAGGG CCTCGATGTA CCGGAAGGCA TGGGGGTAAT CCTTCGCACG GCCGGTGCCA ATCGCACCAA GGCTGAAATC AAGCGCGACT ACGAATATCT GATGCGGCTT TGGGAGCGGG TGCGCACTTT GACGCTCGAA TCCATAGCCC CTGCCCTCGT TTATGAGGAA GGCAGCCTCA TCAAGCGCGC GGTGCGCGAT CTCTACAACA AGGATATCGA CGAAATCCTG GTGGCCGGTG AAGACGGCTA TCGCGAGGCC AAGGATTTCA TGCGCATGCT GATGCCGAGC CATGCGAAAG CTGTGCAGCC ATACCGCGAC AGCGTGCCGA TTTTCGCGCG CAACGGCATC GAAGCTCAGT TGGATAAGAT GCTGCAGCCG CAGGTGACGC TAAAGTCAGG CGGCTATATC ATCATCAACC AGACTGAAGC CCTTGTCGCC ATCGACGTAA ACTCCGGCCG CTCGACAAAG GAGCATTCCA TCGAGGACAC CGCCCTCCAG ACCAATCTGG AGGCGGCGGA AGAGATATCG AGACAGCTTC GCCTGCGCGA TCTTGCGGGA CTGATCGTCA TCGACTTCAT CGACATGGAG GAGAACCGCA ACAACCGCGC GGTCGAAAAG CGTCTGAAAG AATGTCTGAA GAGCGACCGC GCCCGGATCC AGGTGGGGCG CATCTCGCAT TTCGGCCTGC TGGAGATGTC GCGCCAGCGC ATCCGTTCAA GCGTTCTGGA AAGCACAATG CAGCCCTGCC CCCATTGCGG CGGCACCGGC CATGTGCGTT CCGATTCGTC TGTTGCGCTG CTCGTGGTGC GCGCCATCGA GGAATATCTG TTGAAGGATG GACGCCACGA TATCACCGTG CGCACCCCCA CTTCGACGGC TCTCTACCTT CTCAATCACA AGCGCGCGAC GCTCGTCGAG ATGGAGTCGC GGTTTGGCGT GGAGATCACG ATCGAGACGG ACGAGGAGTT GGGAACCCAG CACTACGCCA TTGTAAAAGG CCAGCCCTCC ACCCGCGTTC CGGCGTCGAG AGCGGTCGTC CAGGCCGTGC CGGAAGTCGA GGATGAAGCG GAGGAGGAAA CCTACGTCGA AGAGACGGAG GAACTGGAGG AGAAGCAGAC GGCAGCCGAG GAGCCGGGCG GTCCTGGCCG CAAGCGGCGC CGCCGCCGCC GTCGGCGTGG AGGAAAGGAC CGTGCCGCCG AGCAAGCTGC GCCGCATTCC GCGGTAACAG AGGAAATCTC GGAGCCGGCA GCCGAGACGG GCGAGGCCGA TCTCACCGCC GCCGAAACGG AAGCGGAGGC GGCAGACGTC GAGGCTGGCG ACGGTGGACC TCGCAAGAAG CGCCACCGCG GAAAGCGCGG CGGCAAGCGC AATCGCCGGG ACGAGGAAGC CGCACCGGAA GATGCGGTAA CGGCGCAGTC AGAGGAACCG GCGGGCGAAA TTCAGGCAGA GGCGGCGAGC GAAGCCGTGT CGAGCGAAGC GGCAGCGGCG ACGAGCGAAG CGGCAGCGGC GGAGGCAGAG CCTGTTGCGG AGGTTTCCGC CGAAGAAGTG GTGGTGGAAG AGAAACCAGC CAAGAAACCG CGCCGAAAGA CCCGCGCGAA AAAGGATGCG GCTGCCGACG AGATCGCGCA GCCAGCCCCG GTGGCGCAGG ACGAAGAACC CGCGCCAGCC GCCCCAACGG TCGAAGCTCT GGTCGAGGAC AAGCCCGAAG ACAAGCCGTC CAAGCCATCA AGGCGAACCG CTGCCAACAC TTCGGAAAAG CCAAAACCCG TCGTTACATC TACCGGGGAA AGCGGTGAAG CACCGGCGCG AAAGACCGGG TGGTGGCAGC GCAAGAGCTT CTTTTAG
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Protein sequence | MPNKMLIDAS HPEETRVVVL RGNRIEEFDF ESQDKKQLRG NIYLARVTRV EPSLQAAFVE YGGNRHGFLA FSEIHPDYYQ IPVADRQALL EAEAEEARAA DEAEEGEAQA GRGRKRRRRD AKTDEVVSEG KDVAQPEAVR DDTVSEPLAA DGNGSDEANG SDEVDTVGAE DALDEAQNRR RPVRRNYKIQ EVIKRRQIML VQVVKEERGS KGAALTTYLS LAGRYSVLMP NTARGGGISR KITNLQDRKR LKEVVKGLDV PEGMGVILRT AGANRTKAEI KRDYEYLMRL WERVRTLTLE SIAPALVYEE GSLIKRAVRD LYNKDIDEIL VAGEDGYREA KDFMRMLMPS HAKAVQPYRD SVPIFARNGI EAQLDKMLQP QVTLKSGGYI IINQTEALVA IDVNSGRSTK EHSIEDTALQ TNLEAAEEIS RQLRLRDLAG LIVIDFIDME ENRNNRAVEK RLKECLKSDR ARIQVGRISH FGLLEMSRQR IRSSVLESTM QPCPHCGGTG HVRSDSSVAL LVVRAIEEYL LKDGRHDITV RTPTSTALYL LNHKRATLVE MESRFGVEIT IETDEELGTQ HYAIVKGQPS TRVPASRAVV QAVPEVEDEA EEETYVEETE ELEEKQTAAE EPGGPGRKRR RRRRRRGGKD RAAEQAAPHS AVTEEISEPA AETGEADLTA AETEAEAADV EAGDGGPRKK RHRGKRGGKR NRRDEEAAPE DAVTAQSEEP AGEIQAEAAS EAVSSEAAAA TSEAAAAEAE PVAEVSAEEV VVEEKPAKKP RRKTRAKKDA AADEIAQPAP VAQDEEPAPA APTVEALVED KPEDKPSKPS RRTAANTSEK PKPVVTSTGE SGEAPARKTG WWQRKSFF
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