Gene Meso_1661 details

Gene Information

• Locus tag: Meso_1661
• Symbol: rpsE
• ID: 4180178
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: -
• Start bp: 1787825
• End bp: 1788382
• Gene Length: 558 bp
• Protein Length: 185 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 638067553
• Product: 30S ribosomal protein S5
• Protein accession: YP_674221
• Protein GI: 110634013
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.115923
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACAGC CACGTAGGGA CGACCGCAGG GAGCGCGAAG AGCGCGACAG CGAGTTCGTC 
GACAAGCTCG TTCACATCAA CCGCGTTGCC AAGGTGGTCA AGGGCGGCCG CCGTTTCGGC 
TTCGCAGCAC TCGTCGTGGT CGGTGATCAG AAAGGCCGCG TGGGCTTCGG ACATGGCAAG 
GCCCGCGAGG TGCCGGAGGC CATTCGCAAG GCTACCGAGA GCGCCAAGCG CGATTTGATC 
TTCGTGCCAC TGCGCGAAGG CCGTACCCTT CATCATGACG TTGGCGGCCA TCATGGCGCC 
GGCCGCGTGC TGATGCGCGC CGCCAAGCCC GGCACTGGGA TCATCGCCGG CGGCCCGATG 
CGCGCCGTCT TCGAGACTCT GGGCGTACAG GACGTGGTGG CCAAGTCGCT TGGATCGTCC 
AACCCGTACA ACATGGTACG GGCGACTTTC GACGCGCTGA AGCGCCAGAT GCACCCGAAG 
GACATCGCCG CCCAACGCGG TATTAAGTAT TCGACCCTGC AGGCGCGCCG CGGCACTGCC 
GTCGCAACCG AGGAATAG 

 

Protein sequence

MAQPRRDDRR EREERDSEFV DKLVHINRVA KVVKGGRRFG FAALVVVGDQ KGRVGFGHGK 
AREVPEAIRK ATESAKRDLI FVPLREGRTL HHDVGGHHGA GRVLMRAAKP GTGIIAGGPM 
RAVFETLGVQ DVVAKSLGSS NPYNMVRATF DALKRQMHPK DIAAQRGIKY STLQARRGTA 
VATEE