Gene Meso_1654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1654 
Symbol 
ID4180171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1782697 
End bp1783707 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content60% 
IMG OID638067546 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_674214 
Protein GI110634006 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCAGA AAAACTGGCA GGAACTGATC AAGCCCAGCA AGATCGAGTT CACGTCGAAG 
GGCCGTACCC AGACCAACCT CGTGGCCGAG CCGCTCGAGC GCGGCTTTGG CCTTACCCTT
GGCAATGCGC TGCGTCGCGT TTTGCTTTCG TCGCTGCGCG GCGCGGCTGT CACCGCGGTG
CAGATCGATG GTGTGCTGCA CGAGTTCTCC TCGATCGCCG GCGTGCGCGA GGACGTGACC
GACATCGTGC TTAACATCAA GGAAATCGCC ATCAGGATGG AAGGCGACGG GCCGAAGCGC
ATGGTTTTGC GCAAGCAGGG CCCCGGCGCC GTCACTGCCG GTGACATCCA GACAGTCGGC
GATGTCGAGA TCCTGAACCC CGAGCATGTG ATCTGCACCC TTGACCAGGG CGCCGAGATC
CGGATGGAGT TTACGGTCAA CACGGGTAAA GGCTATGTCC CGGCCGACCG CAACCGCGCC
GAGGATGCGC CGATCGGGCT CATTCCCGTC GACAGCCTCT ATTCGCCGGT CAAGAAGGTC
TCCTACAAGG TCGAGAACAC CCGTGAGGGT CAGGTCCTCG ACTATGACAA GCTGACCATG
ACGATCGAAA CGGATGGCTC GGTGACCGGC GAGGACGCGG TGGCTTTCGC CGCACGCATC
CTGCAGGATC AACTTGGCCT CTTCGTCAAT TTCGAGGAGC CGCAGAAGGA AGTCCCTGCA
GAGCAGGTTA CAGAGCTCGC CTTCAATCCG GCGCTGCTCA AGAAAGTGGA CGAGCTGGAG
CTTTCGGTTC GTTCCGCCAA CTGCCTCAAG AACGACAACA TTGTCTATAT CGGCGACCTG
ATCCAGAAGA CGGAAGCCGA GATGCTGCGC ACGCCGAATT TCGGGCGCAA GTCGCTCAAC
GAGATCAAGG AAGTGCTGGC CTCGATGGGG CTCCACCTCG GCATGGAAGT GCCGGATTGG
CCACCAGACA ACATCGAAGA GCTCGCCAAG CGCTACGAAG ACCAGTATTG A
 
Protein sequence
MIQKNWQELI KPSKIEFTSK GRTQTNLVAE PLERGFGLTL GNALRRVLLS SLRGAAVTAV 
QIDGVLHEFS SIAGVREDVT DIVLNIKEIA IRMEGDGPKR MVLRKQGPGA VTAGDIQTVG
DVEILNPEHV ICTLDQGAEI RMEFTVNTGK GYVPADRNRA EDAPIGLIPV DSLYSPVKKV
SYKVENTREG QVLDYDKLTM TIETDGSVTG EDAVAFAARI LQDQLGLFVN FEEPQKEVPA
EQVTELAFNP ALLKKVDELE LSVRSANCLK NDNIVYIGDL IQKTEAEMLR TPNFGRKSLN
EIKEVLASMG LHLGMEVPDW PPDNIEELAK RYEDQY