Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1654 |
Symbol | |
ID | 4180171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 1782697 |
End bp | 1783707 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638067546 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_674214 |
Protein GI | 110634006 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCAGA AAAACTGGCA GGAACTGATC AAGCCCAGCA AGATCGAGTT CACGTCGAAG GGCCGTACCC AGACCAACCT CGTGGCCGAG CCGCTCGAGC GCGGCTTTGG CCTTACCCTT GGCAATGCGC TGCGTCGCGT TTTGCTTTCG TCGCTGCGCG GCGCGGCTGT CACCGCGGTG CAGATCGATG GTGTGCTGCA CGAGTTCTCC TCGATCGCCG GCGTGCGCGA GGACGTGACC GACATCGTGC TTAACATCAA GGAAATCGCC ATCAGGATGG AAGGCGACGG GCCGAAGCGC ATGGTTTTGC GCAAGCAGGG CCCCGGCGCC GTCACTGCCG GTGACATCCA GACAGTCGGC GATGTCGAGA TCCTGAACCC CGAGCATGTG ATCTGCACCC TTGACCAGGG CGCCGAGATC CGGATGGAGT TTACGGTCAA CACGGGTAAA GGCTATGTCC CGGCCGACCG CAACCGCGCC GAGGATGCGC CGATCGGGCT CATTCCCGTC GACAGCCTCT ATTCGCCGGT CAAGAAGGTC TCCTACAAGG TCGAGAACAC CCGTGAGGGT CAGGTCCTCG ACTATGACAA GCTGACCATG ACGATCGAAA CGGATGGCTC GGTGACCGGC GAGGACGCGG TGGCTTTCGC CGCACGCATC CTGCAGGATC AACTTGGCCT CTTCGTCAAT TTCGAGGAGC CGCAGAAGGA AGTCCCTGCA GAGCAGGTTA CAGAGCTCGC CTTCAATCCG GCGCTGCTCA AGAAAGTGGA CGAGCTGGAG CTTTCGGTTC GTTCCGCCAA CTGCCTCAAG AACGACAACA TTGTCTATAT CGGCGACCTG ATCCAGAAGA CGGAAGCCGA GATGCTGCGC ACGCCGAATT TCGGGCGCAA GTCGCTCAAC GAGATCAAGG AAGTGCTGGC CTCGATGGGG CTCCACCTCG GCATGGAAGT GCCGGATTGG CCACCAGACA ACATCGAAGA GCTCGCCAAG CGCTACGAAG ACCAGTATTG A
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Protein sequence | MIQKNWQELI KPSKIEFTSK GRTQTNLVAE PLERGFGLTL GNALRRVLLS SLRGAAVTAV QIDGVLHEFS SIAGVREDVT DIVLNIKEIA IRMEGDGPKR MVLRKQGPGA VTAGDIQTVG DVEILNPEHV ICTLDQGAEI RMEFTVNTGK GYVPADRNRA EDAPIGLIPV DSLYSPVKKV SYKVENTREG QVLDYDKLTM TIETDGSVTG EDAVAFAARI LQDQLGLFVN FEEPQKEVPA EQVTELAFNP ALLKKVDELE LSVRSANCLK NDNIVYIGDL IQKTEAEMLR TPNFGRKSLN EIKEVLASMG LHLGMEVPDW PPDNIEELAK RYEDQY
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