Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1512 |
Symbol | |
ID | 4180635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 1611711 |
End bp | 1612571 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638067403 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_674073 |
Protein GI | 110633865 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | [TIGR02019] bacteriochlorophyll 4-vinyl reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.219216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATGA GAGAGATCAG GGCGGGGATA TTATGGCCTT TGGCGGCAAT CCTCATGGTC TTTGCTATCT CCTCCGGCCA GGCCGAGCCC TCTACAAAGA ACGACCTTGA GAAGGTTTGC GGGCTGATCG AAGAGCACAG CGCGAAACAC GGCCTGTCAC CCCACTTTCT CGCACGCCTT CTGTGGAAGG AGAGCCGATT CGATCCAAAC GCGGTGAGCC CCAAGGGTGC CGAGGGGGTG GCACAGTTCA TGCCGGCTAC CGCTTCCCTT CGCGGGCTGA CAGATGCTTT CGACGTCGCG CAGGCCGTCC CGGCCTCCGC CGCCTACCTT TCGGAACTGC GGCAAAGATT TGGCAATCTC GGTTTGGCAG CGGCCGCCTA CAACGCCGGG GAAGCGCGTG TGACCCGATG GCTCTCGAAA GGCGGGTTCC TGCCGCTCGA AACCGAAAAC TACGTAAGGG ATATTCTGGG CGAACCGGTC GACGAGTTTG TGAACCGGAA CCGGGAAGTC GCGATTCCGC CTCTCGAACC CGACAAAAGC TTCGATGACG CATGCCGGCA GCTACCCGCA ACCGCCTCGG CGACTGTCGC GATGGTGAGC GTTCACACCA AGCCTTGGGG CGTCCAGGTG GCCGGCCATT TTCGTCGCAG CGTGGCCGTC CGAAAGTGGG AGAGCCTGCG CAAGCGCGTG GGAGTCGTCA TTCCGAACGA AGAGCCGGTG GTTTCCCGCA TGCGTTCGCC GCGAAGCCGC AGCGGCATAT ATGCGGTGCG GTTCGGCGCG GAAACCCGGG CGCAGGCGGA ACAGATGTGC CGCAAACTGA AAAGCGCCGG CACGAGCTGC ATCGTGCTGC GCAATGGCTG A
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Protein sequence | MKMREIRAGI LWPLAAILMV FAISSGQAEP STKNDLEKVC GLIEEHSAKH GLSPHFLARL LWKESRFDPN AVSPKGAEGV AQFMPATASL RGLTDAFDVA QAVPASAAYL SELRQRFGNL GLAAAAYNAG EARVTRWLSK GGFLPLETEN YVRDILGEPV DEFVNRNREV AIPPLEPDKS FDDACRQLPA TASATVAMVS VHTKPWGVQV AGHFRRSVAV RKWESLRKRV GVVIPNEEPV VSRMRSPRSR SGIYAVRFGA ETRAQAEQMC RKLKSAGTSC IVLRNG
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