Gene Meso_1507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1507 
Symbol 
ID4179272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1605376 
End bp1606557 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content64% 
IMG OID638067397 
ProductROK domain-containing protein 
Protein accessionYP_674068 
Protein GI110633860 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTCA CCTCGCAGAA CTTCTCCTCG CGGAAACAGA TCCAGAGTGC GGTCATCCTC 
GCCGTGATGG ACAATGAACA GGTGTCGCGT GCAGAGCTTG CCCGACTCTC GGGCTTATCC
AAGCAGACGA TGTCGGACGT GTTCCGTGAT CTTGAGGAAG ATGGCTGGAT TGAAGTCGTC
GGACGAACGT CCGGCACTGT CGGCCGCAGC GCGGCCGTTT ATGAACTGTC GCCGAACCGG
GCACTGCTGT TCGGCGCCGA TGTCGGTGGC ACCAAGATTC ACGCCGCGCT TGCGGACGCG
AATGGCAGCG TGCTTGCCGA AATGGAAGAG CCGACGACAC AGGCGGGCGC GGAAGCGTTT
GGCGCGCAGA TCCTCGAGTG CTGCCGGGCG CTGGCGGCAC AGGCGGGCCA GCCTGTGGAG
CGCATTGCGG CCGGCAGCGT CGGAATTCCG GGTGCATTCG ACCCGGCCCG ACGGGCACTG
TTCATGGTGC CCAATATCGC CGGAATGAAC GGCTATGCGA TCGAGGACGA TCTTCAGCGG
CGGCTCGGAT TTCCGGTACG CGTCGACAAC GACGTCAACA TGGCTGCGAA AGGCGAAATG
TGGCGTGGGG AAGGGCGAAA CATCCCCTGT TTTGTGTTCA TTGCGCTCGG CACCGGCATC
GGCATGGGCA TCATCAATGA AGGCCGCGTG CTTTCCGGGT CACGCGGTGC TGCCGGTGAA
ATCTCCACGC TGCCAATTGG CGGCGACCCG TTCGACGCAC GCAACTTCCA TGCGGGGACG
CTGGAGCGCA GCGTCGGCAG CATCGCCATT CGCGATCGCT ATGAGGGCGC TGGCGGCGCC
GCGGGGCTGA CCGTCCGCGA CATTTTTGAT GCCATTGGCA GCGGCGACCA GATCGCCAGC
GCGACACTCA CCGAAGTGGC GCGCCAGATT GCCGTCGGCA TCGTGGCGAT CTGCGCCATT
CTCGACCCGC AGCGGATCGT CATGGGCGGC AGCATCGGCG CACGCGAGGA ACTGGTCGAG
CGCGTCCGGC ATTTCATTCC GCTCTGCACG CCGAGACCGC CGGAATGCGT CGTCAGCACG
CTGGGCCGTC GCGCTGGTCT GCTGGGTACG ATCAGCCAGA GCCGCGACCT GCTGCGCGCG
ATGCTGCTGA CCACGGAACC GTCGAAAGTG GGGCGGCCAT GA
 
Protein sequence
MNFTSQNFSS RKQIQSAVIL AVMDNEQVSR AELARLSGLS KQTMSDVFRD LEEDGWIEVV 
GRTSGTVGRS AAVYELSPNR ALLFGADVGG TKIHAALADA NGSVLAEMEE PTTQAGAEAF
GAQILECCRA LAAQAGQPVE RIAAGSVGIP GAFDPARRAL FMVPNIAGMN GYAIEDDLQR
RLGFPVRVDN DVNMAAKGEM WRGEGRNIPC FVFIALGTGI GMGIINEGRV LSGSRGAAGE
ISTLPIGGDP FDARNFHAGT LERSVGSIAI RDRYEGAGGA AGLTVRDIFD AIGSGDQIAS
ATLTEVARQI AVGIVAICAI LDPQRIVMGG SIGAREELVE RVRHFIPLCT PRPPECVVST
LGRRAGLLGT ISQSRDLLRA MLLTTEPSKV GRP