| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1501 |
|---|
| Symbol | |
|---|
| ID | 4179266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 1598731 |
|---|
| End bp | 1599774 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638067391 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_674062 |
|---|
| Protein GI | 110633854 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGATG AAATCGGACC TGACACGGCG GCGCGCATCC AACTGCTCGT GGTGCCGGAG
ACGACGCCTG GCACCCTCTA CGGGCTCTAC GAGCTTTTCG ATGCGGTGGG CGTGGCGTGG
AAGGACATAA CGGGCGAAGC GGTCAACACG CCTCGCCTCT CCCCTCGCAT TGTATCGGCC
GGCGGAACTG CCTTCGCCTC GCCAATCGGC ATCCCCATTG TGCCGCATGA CGCACTTTCC
GCAGCCGGCC GCGCAGAGGT GGTCATCGTC CCCGACCTAT CGCTGACCCA GGATCACGAT
CCGCGCGGAC GCTGGGCGGA GGAGGCAGCT TGGCTTCGCC GCCGCTTCGA TGACGGCGCA
GTCCTCTGCT CCGTCTGCAC GGGCTCGGTG CTTCTTGCGG AGGCAGGCCT GCTCGAAGGC
GTGGAAGCCA CTACCCACTG GGGCGTTACG CGCCTCTTCT CGCGGTACTA TCCGCGCGTG
AGGCTGCATG CCGAGCGCAT TCTGTCGCCA AGTGGGCCTG AGCACCGCAT CGTCACCTGC
GGCGGTGCGG GCTCCTGGTC AGATCTGGCG CTCTATCTTA TCGCGCGCTT CTGCGGCCCC
GCCGAGGCGG TGCGCCTGGC CAAAGTCTTC GTTCTCGGAG ACCGCAGCGA GGGACAATTG
CCCTTCGCGG CCATGGGCCG CGTGCCTCCC CATAGCGATG CGGCGGTGAG CCGCTGCCAG
GAATGGCTTG CCGATCATTA TTACGAGCCC AATCCGGTCG CCCGCATGGC CGCCCTTTCG
GGCCTTCCAG AACGTACCTT CAAGCGGCGT TTCAAGGCGG CCACCGGTTA TTCGCCGATC
GACTACGTTC AAGCGCTGCG CATCGAGGAG GCAAAGCAAA TGCTGGAGAC GACCGGCCAG
CCGACCGATG CCGTCGCTCA CGCGGTAGGC TATGACGACC CGGCATTCTT CCGCCGCCTC
TTCAAACGCT CGACCGGTGT CACCCCTGCT CGCTACCGCC AACGCTACCG CTTCATCGGC
CTGGCAGCCA AAGACGTGGT CTAA
|
|---|
| Protein sequence | MRDEIGPDTA ARIQLLVVPE TTPGTLYGLY ELFDAVGVAW KDITGEAVNT PRLSPRIVSA
GGTAFASPIG IPIVPHDALS AAGRAEVVIV PDLSLTQDHD PRGRWAEEAA WLRRRFDDGA
VLCSVCTGSV LLAEAGLLEG VEATTHWGVT RLFSRYYPRV RLHAERILSP SGPEHRIVTC
GGAGSWSDLA LYLIARFCGP AEAVRLAKVF VLGDRSEGQL PFAAMGRVPP HSDAAVSRCQ
EWLADHYYEP NPVARMAALS GLPERTFKRR FKAATGYSPI DYVQALRIEE AKQMLETTGQ
PTDAVAHAVG YDDPAFFRRL FKRSTGVTPA RYRQRYRFIG LAAKDVV
|
|---|
| |