Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1156 |
Symbol | |
ID | 4180747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 1264892 |
End bp | 1265455 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638067041 |
Product | polysaccharide export protein |
Protein accession | YP_673717 |
Protein GI | 110633509 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.508119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACTC AGTTCCCACT CCTGACGATG CTGATCGCCG CAGGCCTGTT GGCGGGATGT TCGGGCTATC GTCCAGCCCC ACCAGCCTTC CACAAGGCGC TCTACCAACC CTATATTCTT GATGCGGGCG ATCGCCTGCG CATCACCGTT TTCGATCAGG AGAATCTTTC CAATACCTAC GGCGTCGACC AGGCCGGCTA TATCGCCTTT CCCCTTATCG GCTCGGTTCC AGCGCGCGGG CGCACATTGA AACAGATTGA GCAGACGATC GCTGAAAAGC TGCGTGCCGG CTATCTCCGC GATCCGAATG TGACCGTAGA GGTCGACCGC TATCGTCCGG TCTTCATCAT GGGCGAGATC GGCGCGCCGG GCCAATATTC CTATGTGCCG GGCATGACGG TTCAAAAGGC AATCGCAGCC GCGGGCGGCT TCACCCCACG CGCTTATCAA GGCACCGTCG ATATCACACG CGAGATCAAC GGACGCGTCA TGACCGGCAG GGTGCTTATC TCCGACCCGT TGCTTCCGGG CGATACCATC TATATCAGAG AGCGGCTGTT CTGA
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Protein sequence | MKTQFPLLTM LIAAGLLAGC SGYRPAPPAF HKALYQPYIL DAGDRLRITV FDQENLSNTY GVDQAGYIAF PLIGSVPARG RTLKQIEQTI AEKLRAGYLR DPNVTVEVDR YRPVFIMGEI GAPGQYSYVP GMTVQKAIAA AGGFTPRAYQ GTVDITREIN GRVMTGRVLI SDPLLPGDTI YIRERLF
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