Gene Meso_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1156 
Symbol 
ID4180747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1264892 
End bp1265455 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content59% 
IMG OID638067041 
Productpolysaccharide export protein 
Protein accessionYP_673717 
Protein GI110633509 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.508119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACTC AGTTCCCACT CCTGACGATG CTGATCGCCG CAGGCCTGTT GGCGGGATGT 
TCGGGCTATC GTCCAGCCCC ACCAGCCTTC CACAAGGCGC TCTACCAACC CTATATTCTT
GATGCGGGCG ATCGCCTGCG CATCACCGTT TTCGATCAGG AGAATCTTTC CAATACCTAC
GGCGTCGACC AGGCCGGCTA TATCGCCTTT CCCCTTATCG GCTCGGTTCC AGCGCGCGGG
CGCACATTGA AACAGATTGA GCAGACGATC GCTGAAAAGC TGCGTGCCGG CTATCTCCGC
GATCCGAATG TGACCGTAGA GGTCGACCGC TATCGTCCGG TCTTCATCAT GGGCGAGATC
GGCGCGCCGG GCCAATATTC CTATGTGCCG GGCATGACGG TTCAAAAGGC AATCGCAGCC
GCGGGCGGCT TCACCCCACG CGCTTATCAA GGCACCGTCG ATATCACACG CGAGATCAAC
GGACGCGTCA TGACCGGCAG GGTGCTTATC TCCGACCCGT TGCTTCCGGG CGATACCATC
TATATCAGAG AGCGGCTGTT CTGA
 
Protein sequence
MKTQFPLLTM LIAAGLLAGC SGYRPAPPAF HKALYQPYIL DAGDRLRITV FDQENLSNTY 
GVDQAGYIAF PLIGSVPARG RTLKQIEQTI AEKLRAGYLR DPNVTVEVDR YRPVFIMGEI
GAPGQYSYVP GMTVQKAIAA AGGFTPRAYQ GTVDITREIN GRVMTGRVLI SDPLLPGDTI
YIRERLF