| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1121 |
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| Symbol | |
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| ID | 4179815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 1226020 |
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| End bp | 1227198 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638067005 |
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| Product | ribonuclease D |
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| Protein accession | YP_673682 |
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| Protein GI | 110633474 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.441992 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTGA TCAAATCGCG CTCAGAGCTG GAAAATGCGG TCGCCGCGCT CGAGAACTCC
GATTTCGTCA CTGTTGACAC TGAGTTCATC CGCGAAACCA CATTCTGGCC GGAGCTGTGC
CTCATCCAAA TGGCCGCCCC CGGTGTCACG GCGCTGGTGG ATCCGCTAGC CGATGGAATG
GATCTTGCCC CGTTCTTCCG TCTCATGGGG AACGAGCAGG TCGTCAAAGT TTTCCACGCC
GCGCGGCAGG ATATCGAAAT CATCTACAAT CGCGGCGGCC TCATTCCCCA CCCCATCTTC
GACACGCAGG TTGCCGCAAT GGTGTGCGGG TTCGGGGACA GCATCTCCTA CGACCAACTC
GTGCTCAGGA TCACTGGCGA GCACATCGAC AAGACGTCCC GCTTCACCGA TTGGCGGCAC
CGGCCCCTGT CGGAGAAACA GCTTCGCTAC GCCCTGGCGG ATGTCACGCA TCTCATCCCT
GTTTATGCGC ATCTGACAAC CGAGCTCCAG CGCGGAGGGC GCGAGGGGTG GCTGAAGGAG
GAGATGGATG TCCTGACGGC GCGGGAGACC TATGACCCGC ACCCGGACGA CGCCTGGAAA
CGGCTCAAGA TGCGCGCGCG CAAGCCCGTC GAACTGGCTA TCCTCCAGCG CATCGCCGCC
TGGCGCGAGC GCGAAGCACG TGAGCGCAAC GTGCCGCGCG GCCGCATTAT GAAGGACGAT
GCCCTCTACG AGGTGGCCCA GCAGCAGCCT CGGGACATCG CGGCCTTGAG TCGCCTTAGA
GCGGTTCCCA GGGGCTGGGA ACGTTCGGGC TCTGCAGCCG CCTTGCTCAA AGCGGTGAAC
GACGCGCTGG CGCTGCCGAA GGAGGCACTG CCAAAACTGC CGAGGCCGCA TCACGCGCCG
GAGGGAGCAG CGGCCGCGGC GGAGCTCATC AAGGTGCTGC TCAAGCTCGT GGCGGAGAAG
GAAGGCGTGG CTCCCAAAAT GCTCGCTTCC ACCGACGACA TCGAAAAGAT CGCGGCTGAA
GGCGAGAAGG CCCAGGTTCC GGCGCTTCAT GGCTGGCGCC GCGAGGTTTT CGGCGAAGAG
GCGCTCAAGC TCCTGCGCGG GGAGATCGCA CTGCGCTTCG CCAACCGTCG CATTGAAACC
TTCGCGCCCG CGGACCAGAT GCGCAGCGCG GCGGAATAG
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| Protein sequence | MDLIKSRSEL ENAVAALENS DFVTVDTEFI RETTFWPELC LIQMAAPGVT ALVDPLADGM
DLAPFFRLMG NEQVVKVFHA ARQDIEIIYN RGGLIPHPIF DTQVAAMVCG FGDSISYDQL
VLRITGEHID KTSRFTDWRH RPLSEKQLRY ALADVTHLIP VYAHLTTELQ RGGREGWLKE
EMDVLTARET YDPHPDDAWK RLKMRARKPV ELAILQRIAA WREREARERN VPRGRIMKDD
ALYEVAQQQP RDIAALSRLR AVPRGWERSG SAAALLKAVN DALALPKEAL PKLPRPHHAP
EGAAAAAELI KVLLKLVAEK EGVAPKMLAS TDDIEKIAAE GEKAQVPALH GWRREVFGEE
ALKLLRGEIA LRFANRRIET FAPADQMRSA AE
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