Gene Meso_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1054 
Symbol 
ID4180373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1157853 
End bp1158635 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content64% 
IMG OID638066935 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_673616 
Protein GI110633408 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGTCA GCCTCGCAGG ACGCGCCGCT GTCATTACCG GAGGCTCCAA GGGCCTGGGG 
TTTGCCACGG CGAACCGCTT CGCCGCATCG GGCGCCGATG TGGCGATCCT GGCGCGGACG
CAATCCACCT TGGACGAGGC TGTCGCGGAG ATCAGCAAGA CCGCCAAAGG CCGGGTGCTC
GGCGTATCCT GCGACGTTGC AAAGGCGGCA GAGACGCAAG CCGCCTATGA CAAAGTGGTG
TCGGCCTTCG GCAAGGTCGA CATCCTCGTC AACAATGCGG GCGAATCCCG GCTGGCGCGA
TTCGAAGAGA TCACCGATGC CATGTGGCAC GACGATCTCG AGCAGAAGCT GATGGGCGCG
ATCCGTATGA CGCGCCTGGT CTGGACGCAG ATGAAGGAAC GGCGCTGGGG CAGGGTGATC
AATGTCTTGT CGATCAACGC CAAGAACTCA AGACCTGGCG GCGCGCCCAC GACCGTATCG
CGCGCGGCGG GCCTTGCGCT CACCAAGGTG TTGGCAGGCG AAGGCGCGCC TTATGGCGTG
CTCGTCAATG CGCTGATGGT GGGCAATATC GTCTCGGACC AGACCTTTCG CCGCCACAGG
ATGAGGACCG ACGGCATAAC GCTGGAGGAG ATGGTCGCGG AGATCGGGAA GGATATTCCG
CTCGGGCGCA TGGGGCAGCC CGAGGAATTC GCGAATATGG CCTGCTTCCT GGCGTCGGAC
CTAGCGTCCT ACGTGACCGG CGCCGCGATC CCCGTGGACG GCGGCAAGGC GCCGTTTATT
TGA
 
Protein sequence
MEVSLAGRAA VITGGSKGLG FATANRFAAS GADVAILART QSTLDEAVAE ISKTAKGRVL 
GVSCDVAKAA ETQAAYDKVV SAFGKVDILV NNAGESRLAR FEEITDAMWH DDLEQKLMGA
IRMTRLVWTQ MKERRWGRVI NVLSINAKNS RPGGAPTTVS RAAGLALTKV LAGEGAPYGV
LVNALMVGNI VSDQTFRRHR MRTDGITLEE MVAEIGKDIP LGRMGQPEEF ANMACFLASD
LASYVTGAAI PVDGGKAPFI