Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1054 |
Symbol | |
ID | 4180373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 1157853 |
End bp | 1158635 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638066935 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_673616 |
Protein GI | 110633408 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTCA GCCTCGCAGG ACGCGCCGCT GTCATTACCG GAGGCTCCAA GGGCCTGGGG TTTGCCACGG CGAACCGCTT CGCCGCATCG GGCGCCGATG TGGCGATCCT GGCGCGGACG CAATCCACCT TGGACGAGGC TGTCGCGGAG ATCAGCAAGA CCGCCAAAGG CCGGGTGCTC GGCGTATCCT GCGACGTTGC AAAGGCGGCA GAGACGCAAG CCGCCTATGA CAAAGTGGTG TCGGCCTTCG GCAAGGTCGA CATCCTCGTC AACAATGCGG GCGAATCCCG GCTGGCGCGA TTCGAAGAGA TCACCGATGC CATGTGGCAC GACGATCTCG AGCAGAAGCT GATGGGCGCG ATCCGTATGA CGCGCCTGGT CTGGACGCAG ATGAAGGAAC GGCGCTGGGG CAGGGTGATC AATGTCTTGT CGATCAACGC CAAGAACTCA AGACCTGGCG GCGCGCCCAC GACCGTATCG CGCGCGGCGG GCCTTGCGCT CACCAAGGTG TTGGCAGGCG AAGGCGCGCC TTATGGCGTG CTCGTCAATG CGCTGATGGT GGGCAATATC GTCTCGGACC AGACCTTTCG CCGCCACAGG ATGAGGACCG ACGGCATAAC GCTGGAGGAG ATGGTCGCGG AGATCGGGAA GGATATTCCG CTCGGGCGCA TGGGGCAGCC CGAGGAATTC GCGAATATGG CCTGCTTCCT GGCGTCGGAC CTAGCGTCCT ACGTGACCGG CGCCGCGATC CCCGTGGACG GCGGCAAGGC GCCGTTTATT TGA
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Protein sequence | MEVSLAGRAA VITGGSKGLG FATANRFAAS GADVAILART QSTLDEAVAE ISKTAKGRVL GVSCDVAKAA ETQAAYDKVV SAFGKVDILV NNAGESRLAR FEEITDAMWH DDLEQKLMGA IRMTRLVWTQ MKERRWGRVI NVLSINAKNS RPGGAPTTVS RAAGLALTKV LAGEGAPYGV LVNALMVGNI VSDQTFRRHR MRTDGITLEE MVAEIGKDIP LGRMGQPEEF ANMACFLASD LASYVTGAAI PVDGGKAPFI
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