| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1012 |
|---|
| Symbol | |
|---|
| ID | 4180526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 1109476 |
|---|
| End bp | 1110351 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638066892 |
|---|
| Product | HpcH/HpaI aldolase |
|---|
| Protein accession | YP_673574 |
|---|
| Protein GI | 110633366 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2301] Citrate lyase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCGC TGCTTTTCGT TCCCGCTGAT TCGGAGCGCA AAATGACGAA AGCGCTTCAA
TCCGGGGCCG ACGTGCTGAT CCTGGACCTT GAGGATTCGG TTGGCCCTTC CCGAAAAGAA
GAAGCGCGCC GGCTTGCGGC CGACTTTCTC GCGCGGCACG AGACGCCAAC CCTAATATAT
GTGCGCGTGA ACGCGCTCTC GACGGGACTG ACCGATGAGG ATCTGGCGGC GGTCATGCCG
GGCCGACCGG CAGGGATCAT GCTGCCCAAA GCCGAAGGGG GGCAGGACAT CTCCCTCCTT
TCCGTTAAGC TCCGCGTTTG TGAGGCCGAG AACGGGATTG AGGATGGCGC AACGCACATC
CTTCCCATTA TCACGGAAAC CGGAAAGGCC ATATTTTCGG CCCAGACGAT CGCTGGCTCA
AGCGAGCGGC TTTCCGCTCT CACCTGGGGA GCGGAGGACC TTTCCGCCGC AATCGGAGCG
CGGGCTACCC GCGATGATGC AGGCCGATAT ACGAGTGTTT TCGCGCTTGC ACGCTCCATC
ACCCTCTTTG CCGCCGCCGA TGCCGGCGTG CCGGCGATCG ACACTGTCTT CCCCGCCTTC
CGGGATCTCG ATGCCTTCGC ACGCGATTGC AGAGAGGCGG AACGCGACGG CTTTACGGGA
AAGATGGCCA TCCATCCCTC GCAGGTGCCG TTCATCAATG CCGCCTTCAC CCCTTCCGAG
GAGGCGATCG ATCATTCGCG CCGGGTTGTT GCGGCCTTCG CCGAAACCGG GGAAACCGGC
GTTGTGAATC TCGATGGTGA AATGGTCGAT CGGCCCCATT TCATCCGGGC AACGCGCATC
CTGGAACGCG CGCGCCTTGC CGGACTGGGG GAATAG
|
|---|
| Protein sequence | MRSLLFVPAD SERKMTKALQ SGADVLILDL EDSVGPSRKE EARRLAADFL ARHETPTLIY
VRVNALSTGL TDEDLAAVMP GRPAGIMLPK AEGGQDISLL SVKLRVCEAE NGIEDGATHI
LPIITETGKA IFSAQTIAGS SERLSALTWG AEDLSAAIGA RATRDDAGRY TSVFALARSI
TLFAAADAGV PAIDTVFPAF RDLDAFARDC REAERDGFTG KMAIHPSQVP FINAAFTPSE
EAIDHSRRVV AAFAETGETG VVNLDGEMVD RPHFIRATRI LERARLAGLG E
|
|---|
| |