| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0905 |
|---|
| Symbol | |
|---|
| ID | 4182736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 998227 |
|---|
| End bp | 1000551 |
|---|
| Gene Length | 2325 bp |
|---|
| Protein Length | 774 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638066784 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_673467 |
|---|
| Protein GI | 110633259 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.226148 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGCG CGTATGCGTG GGCATTGCCT ACCGCCCTGT TCTCCAGGGG CGGAAGGCCT
AAGGCGGAAA CCGAGGTCGC CGGCAATGCG AAGATCATTG CCGCGCCGGC TTATGAGCGC
CTGCTCGCAA TCGAGCCCTA CCTGCGTCGG GCCATTCCGA TCCTGATCGT CATTTTCCTG
CTGATCCTCG CGGCGGCGCG CCTGGTGACA CTGCTCAACT GGCACGGCGA CATCGAGAAG
GATACCAAAC GGCATCTCGG CATGGTCGCC AGCAACCTTG CCCAGGCGGT GCAGATTGCG
GGTGTGGAGT CGCTCGCTGA GGTGGGTCAA GCCGAAGTGC TGATCGACGA GACGATCCTG
CGTGCCAGCA TGGATGCCGG CTGGGTGCTC GCGCTCACCG ATTCCCGGTT CGCTGTCACT
GCCGTTTCCG CGAGCGCGCA GAAGATGAAG GGGCAATCCC TCGAAACCGT CGTTTCGGGC
GGGCAGCCGC TCTTCATGTT TGGCGACAGA GCCGGCGTGC TGGAGGTGCA GATCGGCGAG
GCGACATGGT ATGCCGCGGT GAGCCTGCTT CCCGGTGGTG ACGGCGCCGC CGTCGCACTT
GCGCCCCAGG ACCAGGTGTT CGGCGCGTGG CGCAGCACCG TCTCGCTCAA TGTGACGCTC
TTTGCCCTGA CCGCCGGGGT GCTGATGGCG ATCCTTTACG CCTATTTCAG CCAGGCCGCA
CGCGCGCAGG CAGCCGACCG CATTTACCGC GAAGCACATC AAAGGGTGGA CCTCGCCCTT
GTGCGCGGGA AGTGCGGCCT TTGGGACTGG GACATGGCGC GCGGCAAGAT GTACTGGTCC
GCCTCCATGT ACGAGATGCT GGGCTACGAG GCCGCCGATG TGATGCTTTC CTTCGGCGAT
GTGGCGAGCT TGCTTCATCC CGATGACAGC GATCTGTTCG CCGTCGCGAA CAGGATCGTC
GCACGCGAGG TCGAGCAGGT CGACCAGGTG TTCCGGATGC GCCATGCCAA CGGCCAATGG
ATCTGGATCC GGGCCAGAGC GCAGGTGGTG GACCCGGATG CGCCGGAGAT TCACCTGATC
GGCATTGCGG TGGACGTGAC GGAACAACGC ACGCTGGTGC AGCAGTCGGA GGCCGCGGAC
CAAAGGCTGC GCACGGCGAT CGAGAACATC ACGGAATCCT TCGTGCTTTG GGACGCGTCC
GAGCGGCTCG TGATGTGCAA TTCACGTTAT CTGCAGGACA CGGGCCTTGA TCCAAGCGAG
ATCGTTCCGG GCCTGCCCCG CCAGGAAATC GAATCCCGCA TGAAGGCCAC GCGCTATGAG
CGGCGGCTGA CGGGATCGAA CAACGCCAGC GAGGGCATCA CCTATGAACG GCAGCTGGCG
GACGGCCGCT GGCTGCAGGT GACGGAGCTG AAGACGCGTG ACGGCGGCAC GGTTTCCGTG
GGAACCGACA TTACCCAGCT CAAGCAGCAC CAGGAAAAGC TGGTGGAGAG CGAACGCCGG
CTGATGGCGA CGATCCATGA TCTGTCCCTC GCGCGCCGCG CGGAGCAGGA GCGCGGCCAG
GAGCTCGTGG AGCTCAACCG CAAATATATG CGCGAGACCG AGCGCGCCGA ATCCGCCAAC
CGCGCGAAAT CGGAATTCCT CGCGAATATG TCCCACGAGT TGCGGACACC GCTCAACGCC
ATCATCGGCT TCTCGGAACT GATGCAGCAG GGACTGTTCG GTCCGCTCGG CTCGGAGCGC
TATCAGGAAT ATGTGAACGA CATCTACTCC AGCGGCACAT ATCTGCTCGG CGTGATCAAT
GACATCCTCG ACATGTCGAA GATCGAGGCA GGCCAGTTCT CAATCCACCG GGAGAGCATC
GACCTTTCCG AGGTCATCCG CGAAACCATG CGCGTGGTGA CGCTGCAGGC GGGAAAGAAG
AACATAGAAC TGACAAGCGA CGTTCCAGCC TCTCTCTCGC TTCACGCGGA CCGTCGCGCG
GTGAAGCAGA TCCTCATCAA TCTCCTCTTC AACGCCGTCA AATTCACCGG CCAAGGTGGA
CGCGTGACGC TTCGGGCCCG CGTGGTTTCG AACTCACTGA TGCTGACGAT CAAGGACACC
GGCTGCGGCA TTCCACGCGA GGCATTGAAG AAGCTCGGCC GGCCATTCGA GCAGGTGGAG
AACCAGTATT CGCGCAGTCA CAACGGCTCC GGCCTCGGCC TGGCGATTTC GCGTTCGCTC
ACCGAGCTTC ATGGCGGCGC GCTGCGCATC CGCTCCACCG AAGGCGTGGG CACGATCGTC
TCCATCCGGC TACCCGTGCA GATGGCGCGC AGGATGGCGG CGTAG
|
|---|
| Protein sequence | MASAYAWALP TALFSRGGRP KAETEVAGNA KIIAAPAYER LLAIEPYLRR AIPILIVIFL
LILAAARLVT LLNWHGDIEK DTKRHLGMVA SNLAQAVQIA GVESLAEVGQ AEVLIDETIL
RASMDAGWVL ALTDSRFAVT AVSASAQKMK GQSLETVVSG GQPLFMFGDR AGVLEVQIGE
ATWYAAVSLL PGGDGAAVAL APQDQVFGAW RSTVSLNVTL FALTAGVLMA ILYAYFSQAA
RAQAADRIYR EAHQRVDLAL VRGKCGLWDW DMARGKMYWS ASMYEMLGYE AADVMLSFGD
VASLLHPDDS DLFAVANRIV AREVEQVDQV FRMRHANGQW IWIRARAQVV DPDAPEIHLI
GIAVDVTEQR TLVQQSEAAD QRLRTAIENI TESFVLWDAS ERLVMCNSRY LQDTGLDPSE
IVPGLPRQEI ESRMKATRYE RRLTGSNNAS EGITYERQLA DGRWLQVTEL KTRDGGTVSV
GTDITQLKQH QEKLVESERR LMATIHDLSL ARRAEQERGQ ELVELNRKYM RETERAESAN
RAKSEFLANM SHELRTPLNA IIGFSELMQQ GLFGPLGSER YQEYVNDIYS SGTYLLGVIN
DILDMSKIEA GQFSIHRESI DLSEVIRETM RVVTLQAGKK NIELTSDVPA SLSLHADRRA
VKQILINLLF NAVKFTGQGG RVTLRARVVS NSLMLTIKDT GCGIPREALK KLGRPFEQVE
NQYSRSHNGS GLGLAISRSL TELHGGALRI RSTEGVGTIV SIRLPVQMAR RMAA
|
|---|
| |