Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0748 |
Symbol | ispH |
ID | 4181126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 823320 |
End bp | 824324 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638066627 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_673313 |
Protein GI | 110633105 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0102943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCGG ACAAGCAGAA ATTGACGATA AGGCTGTGCG GCCCGCGTGG CTTTTGCGCT GGTGTTGACC GGGCGATCCA AATCGTCGTG CTCGCGCTCA AGAAATACGG GCCCCCCGTC TATGTGCGCC ACGAGATCGT GCACAACCGC TACGTGGTCG AAGGTCTGCA GCAGCGCGGC GCCATCTTCA TCGAGGATCT GGACGAGATC CCCGAGGAGC ATCGCGAGCG CCCGGTCGTC TTTTCGGCCC ACGGCGTGCC CAAATCCGTG CCGGCCGATG CCCAGGCGCG CAATCTCTTC TATCTCGATG CGACCTGCCC CCTGGTTTCG AAGGTGCACA AGCAGGCCAT GCGGCACCAG CGCCTCGGCC GCCACGTGCT TCTGATCGGC CATGCCGGCC ACCCGGAAGT GATCGGCACC ATGGGCCAGT TGCCTCACGG TGCCGTCACA CTGATCGAGA CGGTGGAGGA TGCACTTCAC TTCCCTCCGC CTGCGGGCGT CGAGCTTGGC TATGTAAGTC AAACCACGCT TTCGCTGGAA GATACGGCGG AAATTATCAG TGCGCTGGAG CGCAGATTCG ATAACATCCA TGCTCCGGCT GCGGAATCCA TCTGCTATGC GACGACCAAC CGGCAGAACG CCGTGAAGGC AGCCGCGCCG GGTTCGGATC TTTTCCTGGT CGTTGGCGCG CCCAATTCCT CCAATTCCCG CCGCCTGGTC GAAGTGGCGG AACGGGCAGG GGCCAGGCGT GCGCTCCTGG TGCAGCGGGC CTCGGAAATT CCGTGGGAAG AAATCGCCGA CCTTTCGGTG CTCGGGCTTT CTGCGGGGGC TTCGGCGCCG GAAATCATCG TGGACGAGAT AATCGCCGCC TTTGCCGACA GTTATGACGT ATCGGTGGAA CTCGCCATCA CGGCGGAGGA ACCGGAGAAT TTTCCCGTTA TGCGGGCACT GCGCGACGTG GAGCTGACCA AGGCGGACAT GGCCTTCGTC AATGGCGTGG GATAG
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Protein sequence | MSADKQKLTI RLCGPRGFCA GVDRAIQIVV LALKKYGPPV YVRHEIVHNR YVVEGLQQRG AIFIEDLDEI PEEHRERPVV FSAHGVPKSV PADAQARNLF YLDATCPLVS KVHKQAMRHQ RLGRHVLLIG HAGHPEVIGT MGQLPHGAVT LIETVEDALH FPPPAGVELG YVSQTTLSLE DTAEIISALE RRFDNIHAPA AESICYATTN RQNAVKAAAP GSDLFLVVGA PNSSNSRRLV EVAERAGARR ALLVQRASEI PWEEIADLSV LGLSAGASAP EIIVDEIIAA FADSYDVSVE LAITAEEPEN FPVMRALRDV ELTKADMAFV NGVG
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