Gene Meso_0748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_0748 
SymbolispH 
ID4181126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp823320 
End bp824324 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content62% 
IMG OID638066627 
Product4-hydroxy-3-methylbut-2-enyl diphosphate reductase 
Protein accessionYP_673313 
Protein GI110633105 
COG category[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0761] Penicillin tolerance protein 
TIGRFAM ID[TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0102943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCGG ACAAGCAGAA ATTGACGATA AGGCTGTGCG GCCCGCGTGG CTTTTGCGCT 
GGTGTTGACC GGGCGATCCA AATCGTCGTG CTCGCGCTCA AGAAATACGG GCCCCCCGTC
TATGTGCGCC ACGAGATCGT GCACAACCGC TACGTGGTCG AAGGTCTGCA GCAGCGCGGC
GCCATCTTCA TCGAGGATCT GGACGAGATC CCCGAGGAGC ATCGCGAGCG CCCGGTCGTC
TTTTCGGCCC ACGGCGTGCC CAAATCCGTG CCGGCCGATG CCCAGGCGCG CAATCTCTTC
TATCTCGATG CGACCTGCCC CCTGGTTTCG AAGGTGCACA AGCAGGCCAT GCGGCACCAG
CGCCTCGGCC GCCACGTGCT TCTGATCGGC CATGCCGGCC ACCCGGAAGT GATCGGCACC
ATGGGCCAGT TGCCTCACGG TGCCGTCACA CTGATCGAGA CGGTGGAGGA TGCACTTCAC
TTCCCTCCGC CTGCGGGCGT CGAGCTTGGC TATGTAAGTC AAACCACGCT TTCGCTGGAA
GATACGGCGG AAATTATCAG TGCGCTGGAG CGCAGATTCG ATAACATCCA TGCTCCGGCT
GCGGAATCCA TCTGCTATGC GACGACCAAC CGGCAGAACG CCGTGAAGGC AGCCGCGCCG
GGTTCGGATC TTTTCCTGGT CGTTGGCGCG CCCAATTCCT CCAATTCCCG CCGCCTGGTC
GAAGTGGCGG AACGGGCAGG GGCCAGGCGT GCGCTCCTGG TGCAGCGGGC CTCGGAAATT
CCGTGGGAAG AAATCGCCGA CCTTTCGGTG CTCGGGCTTT CTGCGGGGGC TTCGGCGCCG
GAAATCATCG TGGACGAGAT AATCGCCGCC TTTGCCGACA GTTATGACGT ATCGGTGGAA
CTCGCCATCA CGGCGGAGGA ACCGGAGAAT TTTCCCGTTA TGCGGGCACT GCGCGACGTG
GAGCTGACCA AGGCGGACAT GGCCTTCGTC AATGGCGTGG GATAG
 
Protein sequence
MSADKQKLTI RLCGPRGFCA GVDRAIQIVV LALKKYGPPV YVRHEIVHNR YVVEGLQQRG 
AIFIEDLDEI PEEHRERPVV FSAHGVPKSV PADAQARNLF YLDATCPLVS KVHKQAMRHQ
RLGRHVLLIG HAGHPEVIGT MGQLPHGAVT LIETVEDALH FPPPAGVELG YVSQTTLSLE
DTAEIISALE RRFDNIHAPA AESICYATTN RQNAVKAAAP GSDLFLVVGA PNSSNSRRLV
EVAERAGARR ALLVQRASEI PWEEIADLSV LGLSAGASAP EIIVDEIIAA FADSYDVSVE
LAITAEEPEN FPVMRALRDV ELTKADMAFV NGVG