| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0735 |
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| Symbol | |
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| ID | 4180213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 808705 |
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| End bp | 810657 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638066614 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_673300 |
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| Protein GI | 110633092 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAAGA TAAAAAACGA TAAGCGAGAA ACGGGCCATT TGAAGTCGCC GCCCGAAACG
CCTCTGTTAA ACCGTGTCCG GTTCCCTTCG GATCTGAAGC AGATTCCCGA GGAGGATCTG
CCGCAGCTCG CCGAGGAGTT GCGGGCGGAG ATGATCGATG CGGTTTCGCA GACGGGCGGG
CATCTGGGCG CTGGCCTGGG CGTCGTCGAG CTTACGGTCG CGCTGCACTA CATTTTTGAT
ACGCCGCATG ACCGGCTGAT CTGGGATGTC GGCCATCAGG CCTACCCGCA CAAGATTCTC
ACCGGCCGGC GCGACCGCAT CCGCACCCTG CGTCAGGAGG ACGGGCTTTC CGGCTTCACC
AAGCGTTCGG AGAGCGAATA CGATCCTTTC GGCGCAGCCC ATTCCTCCAC GTCGATCTCC
GCCGGGCTCG GCATGGCCGT GGCGAGGGAG CTTTCCGGCG GCCAGCGCCA CGTGATCGCC
GTCATCGGCG ATGGAGCGCT TTCGGCGGGC ATGGCCTATG AGGCCATGAA CAATGCCGGC
GCGCTTGATG CGCGGCTGAT CGTCATCCTG AACGACAACG ATATGTCCAT TGCGCCGCCC
ACGGGTGCGA TGAGCACTTA TCTGGCGCGC CTTGCCTCAG GCCGCGCTTA TCGGGGAATC
CGTGACGTCG GCAAAAAACT CACCTCCCAT TTGGGCAAGT CGTTTGACCG CGCCATCACC
CGCGCCGTGG AGCACGCGCG CGGTTTTGTG ACGGGCGGCA CTCTGTTCGA GGAGATGGGC
TTCTTCCACA TCGGCCCGAT CGACGGCCAC GATCTGGAGG CGCTCGTGCC GGTGCTCCGC
AATGTGCGCG ACAATGGCAC GGGCCCGGTG CTGATCCACG TGGTTACCCA AAAGGGCAAG
GGCTATCCGC CGGCGGAAGC TGCGGCGGAT AAGTATCACG GCGTCGCAAA GTTCGACGTG
ATCACCGGCG CTCAGGCCAA ATCACCTGCG GGCGCGCCGA GCTACACGAA AGTGTTCGCC
CAGGCGCTTG TCCAGGAGGC GCGGGAGGAT AAACGGATCG TGGCCATCAC GGCGGCCATG
CCCTCGGGCA CGGGTCTTGA TCTGTTCGAA AAGGAGTTTC CGGACCGCAG CTTCGATGTC
GGCATTGCCG AGCAGCACGC GGTGACCTTC GCCGCCGGCC TCGCCACCGA GGGCTATCGG
CCCTTTGCGG CGATCTATTC CACCTTTTTG CAGCGCGCCT ATGACCAGGT GGTGCATGAC
GTGGCGATCC AAAACCTGCC CGTCCGCTTC GCCATCGATC GCGCGGGCTT CGTCGGCGCC
GATGGCGCCA CCCATTGCGG TGCTTTCGAT GTCGCCTATC TCGCCACACT GCCCAATATG
GTCGTCATGG CGGCCGCGGA TGAGGCCGAG CTGAAGCACA TGGTTCGCAC CGCTGCTGAC
CATGACGAAG GTCCCATCGC ATTCCGTTAT CCCCGCGGAG AGGGCACAGG CGTTCCGCTG
CCTCAGCGCG GCGAGATCCT GAAAATCGGC AAGGGCCGTA TCGTCCGCGA GGGCAGCAAG
ATCGCGCTCC TCTCGCTCGG CACACGCCTT GCTGACTGCA TGATTGCGGC CGAAGAGCTT
GAGGCGGCGG GTCTTTCCAC CACCGTTGCC GATGCTCGCT TTGCAAAGCC GCTCGATGCG
GACCTTATCC GCCGGCTTGC GCGCGAGCAT GAGGTTCTTG TCACCGTCGA GGAAGGCTCC
ATCGGCGGCT TCGGTGCGCA TGTGCTGCAC TTCCTGGCGC ATGAGGGCCT TCTCGAAAAT
GGGCTCAAGG TTCGCCCGCT CGTAATGCCG GACATCTTCA TGGATCAGGC GAAGCCGGAA
AAGATGTATG CCAAGGCTGG GCTCGACGCG GCGGGCATCG TGAAGACGGT TTTCGCCGCG
CTCGGCCAGG CGGAGCAGGC GGCAAGGGCT TGA
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| Protein sequence | MSKIKNDKRE TGHLKSPPET PLLNRVRFPS DLKQIPEEDL PQLAEELRAE MIDAVSQTGG
HLGAGLGVVE LTVALHYIFD TPHDRLIWDV GHQAYPHKIL TGRRDRIRTL RQEDGLSGFT
KRSESEYDPF GAAHSSTSIS AGLGMAVARE LSGGQRHVIA VIGDGALSAG MAYEAMNNAG
ALDARLIVIL NDNDMSIAPP TGAMSTYLAR LASGRAYRGI RDVGKKLTSH LGKSFDRAIT
RAVEHARGFV TGGTLFEEMG FFHIGPIDGH DLEALVPVLR NVRDNGTGPV LIHVVTQKGK
GYPPAEAAAD KYHGVAKFDV ITGAQAKSPA GAPSYTKVFA QALVQEARED KRIVAITAAM
PSGTGLDLFE KEFPDRSFDV GIAEQHAVTF AAGLATEGYR PFAAIYSTFL QRAYDQVVHD
VAIQNLPVRF AIDRAGFVGA DGATHCGAFD VAYLATLPNM VVMAAADEAE LKHMVRTAAD
HDEGPIAFRY PRGEGTGVPL PQRGEILKIG KGRIVREGSK IALLSLGTRL ADCMIAAEEL
EAAGLSTTVA DARFAKPLDA DLIRRLAREH EVLVTVEEGS IGGFGAHVLH FLAHEGLLEN
GLKVRPLVMP DIFMDQAKPE KMYAKAGLDA AGIVKTVFAA LGQAEQAARA
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