Gene Meso_0712 details

Gene Information

• Locus tag: Meso_0712
• ID: 4180190
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: +
• Start bp: 784426
• End bp: 786459
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 638066591
• Product: tetratricopeptide TPR_2
• Protein accession: YP_673277
• Protein GI: 110633069
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3063] Tfp pilus assembly protein PilF

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGCTAA CCAGGGCAAC ACTTAAAGCG ACGGCGGCAC TCGCGGTCTT CATGGCATTT 
TCCGCGCAGG CCGGGGTCGC CAAGGAAACT GGGGATACGG CCGGCCCGGT TCAGACCCTC 
ACTTTCTCGG GTGCTTATCT GGCAGGGCGA GCGGCCGAGT TTGACGACGA CCTGAAGAGC 
GCTGTGACCT ATTACGAGCG CGCGCTCTCG CTCGATCCCG ACAATACGGA TCTGCAGCGC 
ACTTTGCTGC TGGCGCTGGT ATCGCAAGGC GAGGTGGACA AGGCGCTTCC CTACGCGGAC 
AAGCTGAAAG CCGTTCCGGA GGTGGAGCGC TTCTCCCGCC TCACGCTTGC GGTCGATTCG 
TTCCGCAAGA ACGATTTTGC TGCGGCCGAG CGCTGGTTGA ACCTCGTTCT GGAATCGGAT 
CTCGACCGCC TCATTACCGG CATCATGACG AGCTGGGCGA AGGTGGGGCA GGGCGATGCG 
GACGGCGGGC TCACGAGCCT GGAGAATCTG AGCGGCCCGC CGTGGTATGA GCTGTTCAAG 
GCCTATCACC GTGCGCTCAT TCTGGCCAAT GAGGGGCGTA CCGAAGAGGC GGATGCAGCC 
TTCGACCAGG TGATCAGCGA GCTTGCTCCA CGCTCTGTGG CGCCGGACAC TCTTGGCCGG 
CTCGCCGAGG TCTATGCCTC CTATTTGTCG AGCCGCGGCG AGAAGGAGCG TGCGCTTGCT 
GTCCTCCAGC AGGCAGAGGA GACTGGCGGC GGTATCGCGA CCATTCCGGA ACTTCGCGCC 
AAACTGGAAA CTGGCGGGAA GCTCGATTCG GTCGTGGCGA ACGCCTCGGA TGGAGCGGCC 
GAGATCCTGC TCAATGTCGC CACCGAGCTC GCGAGCGGTG GTGGTGATTC CTATGTCCGT 
GTCTATCTGC AGCTTGCTCG TGCGCTGCGC CCGCATGGCG ACGCCGTTCT CGTGCAGCTT 
GCCCATGTTG CCGAGCGGCA GCAGGATGGC GAAGGGGCGA TCGCGATCTA TCGCATGATC 
GAAAAGGATT CTCCCTGGAC GCGCTTTGCG GAATTTCAGA TCGGCCTCAA CCTGGCCGAC 
CTTGAGCGGA ACGATGAAGC GGTCGCGCAT CTGAAGAAGG TTTTGGAAGC CGACCCCAAG 
GACCTGCGCG CCTATCTCGC CCTGGGCGGC GTCTATTCCA GCCAGAAGAA CTACAAGGCG 
GCCGCCGAAC TCTACGATGA TGCAGTGGCT GAAATTCCGG AGCCGGGGCG CGAGCACTGG 
AACATCTTCT ATCAGCGCGG CATCGCCTAT GAGCGGCTTA AGGAGTGGCC CAAGGCCGAA 
CCCAATTTCA AGAAGGCGCT GGAGCTTTAT CCCGATCATC CCCAGGTGCT GAATTATCTC 
GGCTATTCCT GGATCGACAT GAACATGAAC CTCGAAGAGG GCATGGAACT GATCAAAAAG 
GCGGTGGAGC TGCGGCCAAG TGACGGCTAC ATCGTCGATT CGCTCGGCTG GGCCTATTAC 
AAGCTCGGCC AGTACGACGA AGCGGTGGAG CATCTGGAAC GGGCGGTTTC CTTGCGTCCG 
GAAGATGCGG TCCTGAACGA CCATCTGGGC GACGTTTATT GGCGCGTCGG CCGCCATCTC 
GAAGCGCGCT ATCAATGGTC GCAGGTAAAG ACCCTTGAGC CTGAGCCCGA CCTTCTGGCC 
CAGATCGAGG AGAAGTTGAA GAACGGCCTG CCGCCCGTGG ATGGCGAGAA GGTGGCTGAC 
GCTGCAGGCA ACGCACGCAC CGTCAGCGAC GGCGCGCCCT CCGAGCCTGC CCGGCAGCCG 
GAGCAGCCGC AGGCCCAGCC GGCCGCGCCC GCTGAGCCCG CGCAAGGCGC AACTGCCGAG 
ACGGAGGCTA CCTATAGGGT AAAGCCCGGC CAGTCCCTCT GGTCGATCGC CGTCGAGGAA 
CTGGGCAATG GCGAACGCTT TCGCGAGATT CTCGATTTGA ACCCGGTCCT GAGGGGTGAT 
CCCAACCGCA TCAGGCCTGG CCTGGAACTG AAGCTGCCGA CAGCGGGGCA GTAG 

 

Protein sequence

MRLTRATLKA TAALAVFMAF SAQAGVAKET GDTAGPVQTL TFSGAYLAGR AAEFDDDLKS 
AVTYYERALS LDPDNTDLQR TLLLALVSQG EVDKALPYAD KLKAVPEVER FSRLTLAVDS 
FRKNDFAAAE RWLNLVLESD LDRLITGIMT SWAKVGQGDA DGGLTSLENL SGPPWYELFK 
AYHRALILAN EGRTEEADAA FDQVISELAP RSVAPDTLGR LAEVYASYLS SRGEKERALA 
VLQQAEETGG GIATIPELRA KLETGGKLDS VVANASDGAA EILLNVATEL ASGGGDSYVR 
VYLQLARALR PHGDAVLVQL AHVAERQQDG EGAIAIYRMI EKDSPWTRFA EFQIGLNLAD 
LERNDEAVAH LKKVLEADPK DLRAYLALGG VYSSQKNYKA AAELYDDAVA EIPEPGREHW 
NIFYQRGIAY ERLKEWPKAE PNFKKALELY PDHPQVLNYL GYSWIDMNMN LEEGMELIKK 
AVELRPSDGY IVDSLGWAYY KLGQYDEAVE HLERAVSLRP EDAVLNDHLG DVYWRVGRHL 
EARYQWSQVK TLEPEPDLLA QIEEKLKNGL PPVDGEKVAD AAGNARTVSD GAPSEPARQP 
EQPQAQPAAP AEPAQGATAE TEATYRVKPG QSLWSIAVEE LGNGERFREI LDLNPVLRGD 
PNRIRPGLEL KLPTAGQ