| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0600 |
|---|
| Symbol | |
|---|
| ID | 4179345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 673847 |
|---|
| End bp | 675967 |
|---|
| Gene Length | 2121 bp |
|---|
| Protein Length | 706 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638066479 |
|---|
| Product | CheA signal transduction histidine kinase |
|---|
| Protein accession | YP_673165 |
|---|
| Protein GI | 110632957 |
|---|
| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGG CAGATCTCGA TCGCCAGTTG CTCGGCCTGT TCATCAGGGA GGTGCAGGAG
CGTTCGGGCG AGTTGGAGCG CATGCTGCTC GCGGTCGAAG GCGCCGCAGG GGCAGAGGAG
CGGCGGCACT TGCTGGAAAG GCTGCTGCGC ATCGCACATA GTCTTAAGGG GGCTGCGGGG
CTGGTGGAAA TCCGCTCTAT TGAGAAGGTG TGCCACAGGA TGGAAGATCT TCTTGCCCAG
CTCGCGCGCG CTGAACGCCC CCTGGAGAGG GCGGATCTTG ATGTGCTGCT CGAAGCAACG
GACTGGATCG CGCAAACCGG AGGCAAGTTG GAGCGGGAGC CCGGTGCCCC GATGACTCCG
ACCGAAGATG TGCTCGAACG GCTGGATGCA AGGCTCGGGG AAAAGCCGAA AGCGCCTCAG
GATACCCGCG CCGCTGGCGG CGTGCCCATG CCGCCTGTGC GGACGAGCGA TCTCGACGGC
TCTATTCGGC TTTCCGGCCA CCGCCTCGAC GCGCTTCTTT ACAGGAGCGG TGAGTTGCTC
GCCGCAAAGT CGCGGCTGAG CCTGAGGGCT GCTGAAGCCG CCTCCCTGCG GGAGCGGTTC
AGGCGGGTTC GTTTCCCGCA CACCGCCAAC GGCGAGGCGG CGCCATCGCT CGACGAGAGT
TTGCGGGAAC TGGCTGCCGG GCTCTCAGAG GACGCAAGAC TGATAGGCAG CCTTGTCGGC
GCGCTCGATC ACGAGATTCG GCGCGCCCGC ATGCAGCGTT TCGCGGAAGC CTGCCAGGGC
CTTCCCCGCC TCGTCCGGGA TATTGGGAAT GAGTCTGGAA AACTGGCGGA GCTGAACATC
CTCGGCGGTG AAATCGAGGT CGACCGGTCC ATCGTCTCGG GGCTTCAGGA TTCTCTCAGG
CACCTCGTGC GCAACGCCAT GGGACATGGC ATCGAGACGC CGCCTGAGCG CCGCAAGGCA
GGCAAGCCAG AGAAGGGTAG GATAACGGTC TCGGCTGCAC TGTTCCGCGA TCGATTTCAG
GTACATGTCG AGGATGACGG CCGGGGCTTC GACCTGAAGT CGATCGCCGA AGCCGCAGCC
GGGAAGGGAC TACCCGAAGC GCAGGACGAG CGGCAACTTC TGCGCCGGGC ATTTGAGCCG
GGCATTTCGA CATCGGCCGA GGTTACCAGC CTTTCGGGCC GCGGTGTCGG GCTCGATATC
GTCCGCAACG CAGTGGAGGC GATGAGGGGT ACGGTCGAGC TTTCCAACGT TCGGGGCGGC
GGCGCGGCCT TCACCATGAC GCTGCCGCTG ACCCTGGCCA CAGTTCGGGC GCTGGAGGTG
ATGTCTGGCG GTCAAATCTT CACCATCGAC ACCTCTTCCG TACGCAAAGT AGGCCAGATC
TCCACTCGCG ATCTGCCTCA ACGCGGCAAG CCGAACCTAC TCAAAACGGC TAACGGGAAT
GTGCGGGTTC TCGATCTTGC CACCTGGCTC GGTTTTCCCG GACCACTGAT GCCGGATGGG
AAAGACATTC GCACGGCTGT ATTTGTTGGC ACGGCCGGTG ATGAAACCGC TGTTCTGGTG
GAGCAGATCC TGGAGGAACA AGAGATGCTG GTGCGCTCGC TCGGGCCGCG CCTGGCGAAC
ACGAGGTGCT ACAGCGGCGC CACCATCCTT CCGGACGGGC CCATCGCCCT GCTTCTGAAT
GCGGCCGCTC TGATCGAGGC GGCGGCGTCG GGCGAGTATT CTGGAACCGA TGCCTATTCC
CTCCAAGTGC GGCAGGCACG GAAGAAAATT CTCGTCGTCG ACGATTCTCC TTCCGTGCGC
GCACTGGAAA AACTTATCCT CGAGGGTGCC GGCTACGACG TGGCAATTGC GGCCGATGGG
GCCGAGGCAT GGAAGCACCT GCGGACCCAT GGCGCAGACG TGGTGGTGGC TGATATCGAC
ATGCCGGAAA TGGACGGCGT TGCACTCACC CAAACAATAA GACGGTCCCG GAAATTCGCC
CAATTGCCGG TCATATTGAT CTCAGGGCGC GATACTGTCG AGGAGAAGGA GCAGGGTCTG
CATGCAGGCG CCAACGCCTA CATGGCCAAG AGCAGCTTCG ACCAGCAGCT CTTCTTGGAA
GCGGTTCGCC AGATGGTGTG A
|
|---|
| Protein sequence | MAKADLDRQL LGLFIREVQE RSGELERMLL AVEGAAGAEE RRHLLERLLR IAHSLKGAAG
LVEIRSIEKV CHRMEDLLAQ LARAERPLER ADLDVLLEAT DWIAQTGGKL EREPGAPMTP
TEDVLERLDA RLGEKPKAPQ DTRAAGGVPM PPVRTSDLDG SIRLSGHRLD ALLYRSGELL
AAKSRLSLRA AEAASLRERF RRVRFPHTAN GEAAPSLDES LRELAAGLSE DARLIGSLVG
ALDHEIRRAR MQRFAEACQG LPRLVRDIGN ESGKLAELNI LGGEIEVDRS IVSGLQDSLR
HLVRNAMGHG IETPPERRKA GKPEKGRITV SAALFRDRFQ VHVEDDGRGF DLKSIAEAAA
GKGLPEAQDE RQLLRRAFEP GISTSAEVTS LSGRGVGLDI VRNAVEAMRG TVELSNVRGG
GAAFTMTLPL TLATVRALEV MSGGQIFTID TSSVRKVGQI STRDLPQRGK PNLLKTANGN
VRVLDLATWL GFPGPLMPDG KDIRTAVFVG TAGDETAVLV EQILEEQEML VRSLGPRLAN
TRCYSGATIL PDGPIALLLN AAALIEAAAS GEYSGTDAYS LQVRQARKKI LVVDDSPSVR
ALEKLILEGA GYDVAIAADG AEAWKHLRTH GADVVVADID MPEMDGVALT QTIRRSRKFA
QLPVILISGR DTVEEKEQGL HAGANAYMAK SSFDQQLFLE AVRQMV
|
|---|
| |