Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0509 |
Symbol | |
ID | 4182127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 562526 |
End bp | 563515 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638066391 |
Product | type II secretion system protein E |
Protein accession | YP_673077 |
Protein GI | 110632869 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | [TIGR02782] P-type conjugative transfer ATPase TrbB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.77324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCGGTCA ACCATCAGCA ATCGGAAGCA GCCTCACGCG GTGCACGCAT GCTGCGCACC GCGCTGGGGC CTGCGGTCGC CCGATTCCTG GAAGACCCCG CGATCGTCGA GGTCATGCTC AACCCCGATG GGCGGCTCTG GGTCGACCGG CTCTCTGACG GCCTGTCCGA TACGGGGGAA CGACTTTCGG CCGCCGATGG CGAACGCATC ATCCGCCTCG TCGCCCATCA TGTCGGTGCC GAGGTGCATG ACCGACGGCC GCGTGTCTCG GCTGAACTGC CCGAAACCGG CGAGCGCTTC GAAGGCCTGC TGCCGCCGGT CGTGACGGCT CCGGTCTTTG CGATTCGCAA GCCTGCCGTC GCCGTCTTCA CGCTCGACGA CTATGTCGCC GCGGGCATCA TGACGGCCGA CCAGGCCGCC ATCCTCCGGC AGGCGGTCGC AGCGCGCGCC AACGTCCTCG TTGCCGGCGG AACCAGCACC GGCAAGACCA CGCTGACCAA TGCCCTGCTG GCCGAGGTCG CGAAGACAAC CGACCGCGTC ATCGTCATCG AAGACACCCG CGAGCTGCAA TGCAGGGCGC AGAACATCAT CGCCATGCGC ACCAAGGACG GCGTCGCGAC CCTGTCCGAC CTGGTGCGCT CCTCGCTGCG GCTGCGGCCG GATCGGATCC CGATCGGCGA GGTGCGTGGG GCTGAGGCGC TCGATCTCCT GAAGGCCTGG GGCACCGGCC ATCCCGGCGG GATCGGCACG ATCCACGCGG GCACCGCGCT CGGCGCGCTG CGCCGCCTCG AGCAGCTCAT CCAGGAAGCT GTCGTCACCG TCCCCCGGGC GCTGATCGCC GAGACCATCG ATCTGGTGGC CGTGCTCTCC GGCCGCGGCG CAGCGCGGCG TCTCGCCGAA CTCGCGCGCG TCGAAGGGCT CGGGACGGAC ACCGACTACC GCCTTTCCCC CGCAACCCAG CCTCCCGACC CACAAGGAGA ACCCGCATGA
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Protein sequence | MAVNHQQSEA ASRGARMLRT ALGPAVARFL EDPAIVEVML NPDGRLWVDR LSDGLSDTGE RLSAADGERI IRLVAHHVGA EVHDRRPRVS AELPETGERF EGLLPPVVTA PVFAIRKPAV AVFTLDDYVA AGIMTADQAA ILRQAVAARA NVLVAGGTST GKTTLTNALL AEVAKTTDRV IVIEDTRELQ CRAQNIIAMR TKDGVATLSD LVRSSLRLRP DRIPIGEVRG AEALDLLKAW GTGHPGGIGT IHAGTALGAL RRLEQLIQEA VVTVPRALIA ETIDLVAVLS GRGAARRLAE LARVEGLGTD TDYRLSPATQ PPDPQGEPA
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