Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0444 |
Symbol | tdh |
ID | 4179985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 491000 |
End bp | 492034 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638066326 |
Product | L-threonine 3-dehydrogenase |
Protein accession | YP_673013 |
Protein GI | 110632805 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCAACA TGATGAAGGC CTTGGTGAAG GCCAAGCCCG AGGAAGGGCT TTGGATGGAG CGGGTGCCGC TTCCGGAGAT CGGCCCGAAC GACGTGCTGA TCAAGGTGAG GAAAGCTGCC ATCTGCGGCA CGGACGTCCA TATCTGGAAC TGGGACGAAT GGGCAAGAAA GACCGTGCCC GTGCCGCTCG TCACCGGCCA TGAGTTCGTC GGCGAGGTCG TGGATGTCGG CTCAGCCGTG ACCGAATACA GAATCGGGCA GCGTGTTTCG GGCGAGGGGC ACATTGTCTG CGGCCATTGC CGCAACTGCC GGGCCGGGCG TGGACATCTC TGCCGAAACA CGCTGGGCGT CGGCGTTCAC CGGCCGGGTG CCTTTGCCGA ATATATCTCG CTGCCGCAGC ACAATGTCGT GGCGATCCCC GACGACGTGC CGGACGAGAT CGCCGCGATT TTCGATCCGC TTGGAAACGC GGTGCACACC GCGCTCTCTT TCGATCTGGT GGGCGAGGAT GTGCTGGTGA CCGGAGCTGG CCCGATCGGC ATTATGGGCG CGCTGGTGGC GCAGTGCGTA GGTGCGCGCA AAGTGGTCAT CACGGATATC AATCCGGGGC GACTTGCGCT CGCTAAGAAA CTCGGCGTGC GTCACGTGGT GAATGCCAGG GAAGAGAAGC TCACCGATGT AATGAGGAAG CTCGGCATGA CCGAGGGCTT CGACGTGGGC CTGGAGATGT CCGGCTCTGC CTCGGCGTTT CGCGACATGA TCGATGTCAT GAACAATGGC GGCAAAATAG CGATCCTCGG CATAGCGCCG ACGGGTTTCG AGATCGATTG GAACAAGGTG ATTTTCAAGA TGCTCCACCT GAAGGGCATC TACGGCCGGG AGATGTTCGA AACCTGGTAC AAGATGATCG CGCTTGTGCA GGGGCCTCTC GATATCTCCG GCCTGATCAC GCACCGCATC TCTGCCGATG ATTACCGCGA AGGCTTTGCC GCCATGCGCA GCGGCGAGGC CGGTAAGGTT GTAATGGATT GGTGA
|
Protein sequence | MTNMMKALVK AKPEEGLWME RVPLPEIGPN DVLIKVRKAA ICGTDVHIWN WDEWARKTVP VPLVTGHEFV GEVVDVGSAV TEYRIGQRVS GEGHIVCGHC RNCRAGRGHL CRNTLGVGVH RPGAFAEYIS LPQHNVVAIP DDVPDEIAAI FDPLGNAVHT ALSFDLVGED VLVTGAGPIG IMGALVAQCV GARKVVITDI NPGRLALAKK LGVRHVVNAR EEKLTDVMRK LGMTEGFDVG LEMSGSASAF RDMIDVMNNG GKIAILGIAP TGFEIDWNKV IFKMLHLKGI YGREMFETWY KMIALVQGPL DISGLITHRI SADDYREGFA AMRSGEAGKV VMDW
|
| |