Gene Meso_0281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_0281 
Symbol 
ID4182841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp319277 
End bp319825 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content56% 
IMG OID638066162 
Productlytic transglycosylase, catalytic 
Protein accessionYP_672850 
Protein GI110632642 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGGC AAATAACGGC CTCTATATCT AGTCTCCTTC TCTCAACGGT CATCGCCGCC 
GCGAACCCAT GCGAAGCGCA AATCCTGCGG GCTTCGCAGA AATATCATAT CCCGGTCGGC
ATTCTCTACG CGGTAGGCCT TACGGAAACG GGCATAAGAG GCAGCCTGCA GCCCTACGCT
CTCAATATCG AAGGCAAGGC AATCTTCGCG CGCAGCGCTG CCGACGCAAT GGCGGAATTC
AGGAAGGCGC AACAGCGCGG CGCGAAGCTT ATCGATCTCG GCTGCATGCA GATCAACCAC
CATTACCATA GAGACCAGTT CCGCAGCTTG GCGGATATGC TCGATCCACG GCAGAATGTC
GACTATGCCG CACGCTTTCT GGCGCAATTA AAAGGACGGC ACGAGACCTG GTCCCTGGCG
GTTGCTCGTT ATCACGCCGG CCCAAACAAT GATCCGGCAC AGAAACGCTA TCTATGCCGC
GTAATCACAA ACATGGTGGC AACCGGCTTC GGATCATGGA CACCGGCAGC TCGCAAGTTT
TGCAACTAA
 
Protein sequence
MLRQITASIS SLLLSTVIAA ANPCEAQILR ASQKYHIPVG ILYAVGLTET GIRGSLQPYA 
LNIEGKAIFA RSAADAMAEF RKAQQRGAKL IDLGCMQINH HYHRDQFRSL ADMLDPRQNV
DYAARFLAQL KGRHETWSLA VARYHAGPNN DPAQKRYLCR VITNMVATGF GSWTPAARKF
CN