Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0281 |
Symbol | |
ID | 4182841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 319277 |
End bp | 319825 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638066162 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_672850 |
Protein GI | 110632642 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCGGC AAATAACGGC CTCTATATCT AGTCTCCTTC TCTCAACGGT CATCGCCGCC GCGAACCCAT GCGAAGCGCA AATCCTGCGG GCTTCGCAGA AATATCATAT CCCGGTCGGC ATTCTCTACG CGGTAGGCCT TACGGAAACG GGCATAAGAG GCAGCCTGCA GCCCTACGCT CTCAATATCG AAGGCAAGGC AATCTTCGCG CGCAGCGCTG CCGACGCAAT GGCGGAATTC AGGAAGGCGC AACAGCGCGG CGCGAAGCTT ATCGATCTCG GCTGCATGCA GATCAACCAC CATTACCATA GAGACCAGTT CCGCAGCTTG GCGGATATGC TCGATCCACG GCAGAATGTC GACTATGCCG CACGCTTTCT GGCGCAATTA AAAGGACGGC ACGAGACCTG GTCCCTGGCG GTTGCTCGTT ATCACGCCGG CCCAAACAAT GATCCGGCAC AGAAACGCTA TCTATGCCGC GTAATCACAA ACATGGTGGC AACCGGCTTC GGATCATGGA CACCGGCAGC TCGCAAGTTT TGCAACTAA
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Protein sequence | MLRQITASIS SLLLSTVIAA ANPCEAQILR ASQKYHIPVG ILYAVGLTET GIRGSLQPYA LNIEGKAIFA RSAADAMAEF RKAQQRGAKL IDLGCMQINH HYHRDQFRSL ADMLDPRQNV DYAARFLAQL KGRHETWSLA VARYHAGPNN DPAQKRYLCR VITNMVATGF GSWTPAARKF CN
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