Gene Meso_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_0194 
Symbol 
ID4179755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp235838 
End bp236839 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content58% 
IMG OID638066075 
Productphage integrase 
Protein accessionYP_672764 
Protein GI110632556 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.334318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCTCA AGCTCTACAA GCGCGGTGAA GTCTGGTGGT ACCGTGGCAC GGTTGCCGGA 
AGACGCCTAC ACGCAAGCGC TAAAACGACT GACAAAGAAA TCGCCCAGCG GCTCGCCAAC
AGAGCGGAAG CGCAAGCCTT CAAACGTGAT CTCGATGGAC CGGCCTCGGT CCTGACATTC
GCGCACGCCG TGACGCTTTA TCTCGATGCG GGGAAATCTG ACCGCTTCCT AGTCCCCGTC
TTGGAGCATT GGAAGGAAAC ACTGGTCAAG GACATCACGG CGGGTGCCAT CCGGCTTGCG
GCCATCAAGG TCTACCCCAA AGCCTCGCCA TCTACACGCA ACCGCCAGTT CATCACGCCA
ACCGTGGCAG TCATCAATCA CGCTGCCAGC CTGGAGTTGT GCCCGCCGCT ACGGAAAGTG
GAGCGGTTCA AGGTACCCAA AAAGCATCGG GATGAAGCTG ATTGGGATTG GGTACTGGCT
TTCGAGAAGG AAGCGCCGCC ACATCTGGGG GCGTTGGCTG TTTTCGGTTA TCTGACGGGT
GCGCGCCTAA GCAGCCTGAC CGACTTGCAT TGGAAGACCA TAGATTTCCA GAGGCGTGAA
GCTGTCCTAT GGAAGACGAA GAACGGCCAT GACCACGTGG TGCATTTGCC GCCCCATCTG
GTGGTGAGAT TGGCGAACCT GACCACAGAC AGGGGTGGAA AGGTGTTTGG CTACTCCAGC
CGCCACAGCG TCAAGTCGGC CTGGAAGGCG TCCATCAAGA GGGCGGGGAT AAAACCACTC
ACACCGCATG CATTGCGGCA TGGCTTTGCC ACCGGGCTTC TAAGGGCCGG TGTAGACCCC
GTAACTGTGG CGTGGCTTGG TGGCTGGGAA AGCCCACAGA TCGTTATCGA CATCTACGGG
CATGCGATGA AGGACAGAAC AGTCACAAAC CGGCTTACTG GCCCACTAGC GGCCCAAGGC
CCTGACGCCG CCACAGAAAT CCTAACAAAG ACAGGTGCTT AG
 
Protein sequence
MPLKLYKRGE VWWYRGTVAG RRLHASAKTT DKEIAQRLAN RAEAQAFKRD LDGPASVLTF 
AHAVTLYLDA GKSDRFLVPV LEHWKETLVK DITAGAIRLA AIKVYPKASP STRNRQFITP
TVAVINHAAS LELCPPLRKV ERFKVPKKHR DEADWDWVLA FEKEAPPHLG ALAVFGYLTG
ARLSSLTDLH WKTIDFQRRE AVLWKTKNGH DHVVHLPPHL VVRLANLTTD RGGKVFGYSS
RHSVKSAWKA SIKRAGIKPL TPHALRHGFA TGLLRAGVDP VTVAWLGGWE SPQIVIDIYG
HAMKDRTVTN RLTGPLAAQG PDAATEILTK TGA