Gene Meso_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_0089 
Symbol 
ID4179552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand- 
Start bp118021 
End bp118449 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content59% 
IMG OID638065968 
Productlarge conductance mechanosensitive channel protein 
Protein accessionYP_672659 
Protein GI110632451 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAACG GAATGCTGAA TGAATTCAGG GAGTTCATAG CCCGAGGCAA TGTCATAGAC 
CTGGCCGTGG GCGTGATTAT CGGCGGCGCA TTTGGCGGCA TCGTCAGCTC TCTGACCGAC 
GACATCATCA TGCCCATCGT GGGCGCGGTC TTCGGCGGGT TCGACTTCTC CAATTATTTT 
GTCCCGCTCG CTTCCGGTGT GACAGCGGAT ACGCTTGCCC AGGCGCGTGA GCAGGGGGCA 
GTGCTGGCCT ACGGCAATTT CATCACCGTT CTTCTGAACT TCCTCATCCT CGCCTGGATC 
ATTTTCCTGA TGGTCAGGGC CGTGAACAGG CTGCGCAGGC GGCAAGCAGA GCAGCCGGCT 
GAGCCCGCGG CACCGCCTCA GGATGTCCAA CTCCTGACGG AAATTCGGGA TCTGCTGGCA 
AGAAGATAA
 
Protein sequence
MANGMLNEFR EFIARGNVID LAVGVIIGGA FGGIVSSLTD DIIMPIVGAV FGGFDFSNYF 
VPLASGVTAD TLAQAREQGA VLAYGNFITV LLNFLILAWI IFLMVRAVNR LRRRQAEQPA 
EPAAPPQDVQ LLTEIRDLLA RR