Gene Meso_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_0053 
Symbol 
ID4179497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp74305 
End bp75366 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content61% 
IMG OID638065930 
Productgentisate 1,2-dioxygenase 
Protein accessionYP_672623 
Protein GI110632415 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3435] Gentisate 1,2-dioxygenase 
TIGRFAM ID[TIGR02272] gentisate 1,2-dioxygenase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.24261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACG CACTTTCGAA GACGCCGCAG AGTTACATCG ATGCTGTTGA GGCACAGGCG 
CTTGCGCCAC TCTGGGGTCG GCTTCGCGGG CTGGTTCCAA CAGAACCCAA ACCTCAGGCT
GAAGCGCATT TATGGGATTT CGACGCCCTG AAACCTCACA TCCTTGAAGC TGGCCGGCTG
GTGACTGCCA AGGAGGCCGA GCGGCGGGTG CTGATCCTCG AAAACCCGGC ACTAAAAGGA
ACGAGCCGGA TAGCGGATTC TGTCTTTGCG GGTTTCCAGA TCATCCTGCC GGGCGAGGTC
GCGCCTTCGC ACCGCCATAG CCAGGCCGCA CTGCGCTTTG TCCTCGATGG CTCGGGCGCC
TATACCGCCG TGGGCGGTGA GAGAACCACG ATGGAGTTCG GTGACTTCAT TGTGACTCCG
CCGTGGCGCT GGCACGATCA CGGCAATCCC TCTGACGCAC CGATGATCTG GCTCGACGGG
CTCGATATCC CGATGGTGCG GATGTTCAAT GCGGGTTTCG AAGAGGACAT GGAGACAGAG
GCGCAGGAGA TCGTCAAGGA GGAGGGCGAC AGCCTCGCCC GTTACGGTTC AGGGCTGATG
CCCGTGGATC AGAAATGGGA GCGGCTCTCT TCGCCAGTTT TCAACTATTC CTACGAAAAG
AGTCGCGCGG CAGTCGAACA GGCCGCGAGA ACCGGTAAGC CCGACCCCTG CCATGGCTGG
CGGCTGCGCT ATACCAATCC CGTCGATGGC GGATGGGCGA TGCCAACACT CGCGACCTAC
CTGCGCAAAC TGCCGGCGGG CTTCGTCTCA ACCCCTTACC GTTCGACCGA AAGCACGGTC
TTCGTTGTCA CCGAGGGACG CGGGCACGTA GAGGTCGCGG GCAAGCGCAT GGCCTTTAAG
AAGAAGGATA TCTTCGTCGT GCCCGCCTGG ACCTCTTTCA CGCTGGAGGC GGAGCCCGAC
ACCTTCCTTT TCAACTACTC GGATCGTGCC GCGCAAGAAA AACTCGGCTT CTTCATGGAA
GCGCGCGGCA ACGAGGCACC GTCTTTCCCA CCCTCGCATT GA
 
Protein sequence
MSDALSKTPQ SYIDAVEAQA LAPLWGRLRG LVPTEPKPQA EAHLWDFDAL KPHILEAGRL 
VTAKEAERRV LILENPALKG TSRIADSVFA GFQIILPGEV APSHRHSQAA LRFVLDGSGA
YTAVGGERTT MEFGDFIVTP PWRWHDHGNP SDAPMIWLDG LDIPMVRMFN AGFEEDMETE
AQEIVKEEGD SLARYGSGLM PVDQKWERLS SPVFNYSYEK SRAAVEQAAR TGKPDPCHGW
RLRYTNPVDG GWAMPTLATY LRKLPAGFVS TPYRSTESTV FVVTEGRGHV EVAGKRMAFK
KKDIFVVPAW TSFTLEAEPD TFLFNYSDRA AQEKLGFFME ARGNEAPSFP PSH