| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0027 |
|---|
| Symbol | |
|---|
| ID | 4179471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 32123 |
|---|
| End bp | 32911 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638065904 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_672597 |
|---|
| Protein GI | 110632389 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02186] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0927357 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCTC CCCGCGTTGC CGTCCTTATC GTCGGGCTTT GCTTGGGTGG CCAAGCATTC
GCGCAGCAGG AGGAACCCCA GCCGGAAGGG ATTCAGATCG GGCTTTCCAC AGACAGCGTG
GCCATCACGT CAGACTTCTC CGGCACCAAT CTCACCATCT TCGGCGCGCT CGATAACGCC
GACCCGCTGG TGAGCCGGCA GGGACGATAT GACGTGATCG TGGTTCTCGA GGGGCCGCCG
CGCACTACGG TGGTGCGTAA GAAGACGCGC GTGCTCGGTA TGTGGATTAA TACCGAATTG
GTGGCGTTCC GGGATGTGCC TGCTTCTTAT TCGGTAGCCA CGACGCGTCC CCCGCAGGAT
ATTACAGACC CCGCGAGCTA CAAACGGCTG GCGCTCGGCG TCGACAATAT CAACATACGC
CCGCTTGATG AGAGCGACAG CCCCATAACG ATAGAGGAAT TCACCGAAGC GCTTCGCCAA
CAGAAGGAGG CGGCTGCCCT TTACGTGGAG AATGTCGGTG GGGTGCAGTT CCTCTCGCGC
ACGCTGTTTC GCGCAACGCT CTATCTCGCG CCGCACGTGC CGGTCGGAAC GCACAAGGCC
CGCGCCTTCC TATTCCGAAA TGGCGCATTT CTTCGGGAAA CCTCCGCGCC TCTCAGCATC
CGAAAGGCTG GCGTCGAGCA GCAGATTTTC GAATTCGCCC AGCAGCGGAG CCTGCCTTAC
GGCCTTTTTG CCGTTCTGCT TGCGATGATC ACCGGCTGGA TCGGCAGGCT GGTGTTCAGA
AGGGATTAA
|
|---|
| Protein sequence | MPSPRVAVLI VGLCLGGQAF AQQEEPQPEG IQIGLSTDSV AITSDFSGTN LTIFGALDNA
DPLVSRQGRY DVIVVLEGPP RTTVVRKKTR VLGMWINTEL VAFRDVPASY SVATTRPPQD
ITDPASYKRL ALGVDNINIR PLDESDSPIT IEEFTEALRQ QKEAAALYVE NVGGVQFLSR
TLFRATLYLA PHVPVGTHKA RAFLFRNGAF LRETSAPLSI RKAGVEQQIF EFAQQRSLPY
GLFAVLLAMI TGWIGRLVFR RD
|
|---|
| |