Gene Meso_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_0003 
SymbolrecF 
ID4179427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp2827 
End bp4002 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content64% 
IMG OID638065880 
Productrecombination protein F 
Protein accessionYP_672573 
Protein GI110632365 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.671854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGACGA CGGCCACGAC AGGAACTCCG GAAAAGCGGC CGGCGCAGGT CCATATCGCC 
AAGCTGACGC TCTCCAATTT TCGCAACTAC GCCTCGCTCT CGCTCGGCCT GCAGCCTGGC
GCGGTGGTGC TTACCGGCGA GAACGGCGCC GGCAAGACGA ACCTGCTCGA AGCAATCTCC
TTTCTCTCCC CCGGTCGTGG ACTGCGGCGC GCCACATTGG AAGAGGCGAT GCGCATCGGC
TCCAGCGATG GTTTTGCGGT GCATGCGGAG GTGGAAGGAC CTTATGGCTC CTGTCGGATT
GGGACGGGAA CGGCCGGTAC GGCAGCTGAG GGATCAGAAT CCGGGCGACG TGTGCGCATC
GATGGCGAGC CCCAGCGCAG CGCTGAAGCC ATGCTCGATT GGTTGCGGGT GATCTGGCTT
ACCCCGGCTA TGGACGCGCT CTTCACCGGG GCTTCGGCTG ATCGCAGGCG CTTTTTGGAC
CGCCTTGTCC TGGCAATCGA TCCAGCGCAT GGCCGCCGGG CGGCGGATTA TGAAAAAGCC
ATGCGCTCCC GCAACCGGCT TTTCGCGGAT GATGTGCGGG ACGATGCCTG GTTCGATGCC
ATCGAGATGC AGATGGCCGA AACCGGCGTG GCGATTGCCG CGGCGCGTGC CGAGATGTTG
CGGCTGCTTG CCGCAATGAT TGAGCGTCTT CCTGCCGGCA GTCCCTTTCC CAAGGCGCTG
CTCGCGCTAG AAGGCACGGT GGACGAGGCG ATTGCACGAA ACCCGGCTGT CGAGGTTGAG
GAGGATTTCC GTACTCGCTT GCGCGAAGAG CGCCCGAGAG ACCGCGCGGC GGGGCGGGCG
CTCGAAGGGC CGCACCGCAG CGAGCTCCTG GTGCGCCATG CGCCCAAGGA CATGCCGGCG
GAAAGCTGTT CGACCGGAGA ACAAAAGGCG CTTCTCGTTG GGCTCGTGCT TGCCCATGCA
CGGCTGACCG CTGAGCTTTC AGGCATGGCG CCGATTCTGC TCCTGGACGA AATCTCCGCC
CATTTCGATG CCGATCGCCG CGCGGCCCTC TTCGACATCC TCGAGGATCT CAACTGCCAG
GCCTTCATGA CCGGTACGGA ACGCGCGCTC TTCTCCAGCC TGGAGGGCCG GGCCCAATTT
CTCGCCGTAT CGGGCGGCGC AATTCAGTCG GTTTGA
 
Protein sequence
MTTTATTGTP EKRPAQVHIA KLTLSNFRNY ASLSLGLQPG AVVLTGENGA GKTNLLEAIS 
FLSPGRGLRR ATLEEAMRIG SSDGFAVHAE VEGPYGSCRI GTGTAGTAAE GSESGRRVRI
DGEPQRSAEA MLDWLRVIWL TPAMDALFTG ASADRRRFLD RLVLAIDPAH GRRAADYEKA
MRSRNRLFAD DVRDDAWFDA IEMQMAETGV AIAAARAEML RLLAAMIERL PAGSPFPKAL
LALEGTVDEA IARNPAVEVE EDFRTRLREE RPRDRAAGRA LEGPHRSELL VRHAPKDMPA
ESCSTGEQKA LLVGLVLAHA RLTAELSGMA PILLLDEISA HFDADRRAAL FDILEDLNCQ
AFMTGTERAL FSSLEGRAQF LAVSGGAIQS V