| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4522 |
|---|
| Symbol | |
|---|
| ID | 4178446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008243 |
|---|
| Strand | + |
|---|
| Start bp | 86254 |
|---|
| End bp | 87039 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638059409 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_666131 |
|---|
| Protein GI | 110347314 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATTTAG GACTGACGGA CAAGACGGCC CTGGTGCTGG GTGGCAGCGG CGGGCTCGGC
AGCGCAACGG CCCGCAGGCT CGCCGCCGAA GGAGCCAAGG TCGCGGTTGC CGGTCGCGAC
CGGAACAAGG TCGAGGCGAT CGCCTCGTCT ATCCGTGCCG ATGGCGGCAT GGCCATGCCC
ATTGTGTGGG ATCTGGCGGA TCTGGACGCC ATCAAGGATC GTGTCGCCGA AGTGGAGGCG
AAGTTCTCCG GGATCGATAT CCTGGTCAAC AATACAGGCG GACCACCGCC CTCTTCCGTT
GCTGGACAGC CGCGGGAGCT CTGGTTGAAG CAATTCGAAA GCATGGTTCT GTCCGTCATC
GCGCTGACCG ACCAGGTCGT TCCAGGCATG CGCGAGAGGC GATGGGGCCG CATCATCACC
TCCGCCTCTT CCGGAATCAT TGCGCCGATA CCCAATCTCG GCCTGTCGAA TGCTCTTCGC
TCCACCTTGC TCGGCTGGTC CAAGACATTG GCCAGCGAGA TCGCGCGCGA TGGCATCACC
GTCAACATCG TCGTTCCCGG CCGAATTGAG ACTCAGCGGA TCATCTTCCT CGACGAACAG
CGCGCCAAGC GCAGCGGTCG TCCGGTGGAC GAGGTTTCCG CCGAAAGCAT CGCAACCATT
CCTGTCGGAC GCTACGGCAA GCCCGAAGAA TATGCGGATG TGGTCGCCTT CCTCGCAAGC
CGAAATGCAT CTTTCGTGAA CGGCGCGACC TTCCGGGTCG ATGGCGGAAT GATCCCCAGC
GTTTAG
|
|---|
| Protein sequence | MDLGLTDKTA LVLGGSGGLG SATARRLAAE GAKVAVAGRD RNKVEAIASS IRADGGMAMP
IVWDLADLDA IKDRVAEVEA KFSGIDILVN NTGGPPPSSV AGQPRELWLK QFESMVLSVI
ALTDQVVPGM RERRWGRIIT SASSGIIAPI PNLGLSNALR STLLGWSKTL ASEIARDGIT
VNIVVPGRIE TQRIIFLDEQ RAKRSGRPVD EVSAESIATI PVGRYGKPEE YADVVAFLAS
RNASFVNGAT FRVDGGMIPS V
|
|---|
| |