Gene Meso_4486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_4486 
Symbol 
ID4178422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008243 
Strand
Start bp48624 
End bp49616 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content62% 
IMG OID638059375 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_666097 
Protein GI110347280 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.394023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATCTT ATCTGGTCCG ACGATTGTTC ATGGCTATCG TCACGATGGT AGCCATCTCG 
GTCCTGTCCT TCGCGATCAT CCAGCTGCCG CCGGGGGACT ACATCACGAC TTACATCGCC
CAGCTTGCCG CGGATGGCAC GTCGCTGTCC GATGCCGAGG TGCTTGCGCT GCGCGAGCAA
TACGGCTTGG ATCAGTCCTT CCTGGTCCAA TATCTGCGCT GGATCGCCAG CGTGCTGCAC
GGCGATTTCG GCATGTCGAT GGAATGGCGC CGTCCGGTTT CCGAGCTGAT CGGCGAGCGG
CTGTGGCTGA CCATGGCGGT CGCGGTCGCG GCGATCCTGC TGACATGGGC TCTGGCGCTG
CCGATCGGCA TCTATTCGGC TGTTCGCCGC TATTCGGTCG CCGATTACGC CTTCACGATC
GTCGGCTTCA TCGGACTGGC GGTGCCGAAC TTCCTGCTGG CGCTTGCGTT GATGTACTTC
GGCTACAAGT TCTTCGGCAT CAATATCGGC GGCTTGTTCT CGCCGGCCTA TGTTGACGCG
CCGTGGTCGC TCGCCCGGGT CTGGGACCTG ATCAAGCACC TGCCACTTCC GGCAATCGTT
CTGGGAACGG CGGGGACTGC CGAGATGATC CGCGTCATGC GCGCCAATCT GCTGGACGAA
TTGCACCGGC CCTACGTAAA GACCGCGCGC GCCCGCGGGC TGGACGAGCG CAGAGTGATC
CTGAAATACC CCGTGCGGGT GGCACTGAAC CCCTTCGTCA GCATCCTGGC CTACCTGTTC
CCCTATATCG TCTCGGGCAG CATCATCGTC TCGCTGGTGC TGGGCCTGCC GACCGTCGGG
CCCCTGCTTC TGCGGGCGCT GCTGGCGCAG GACATGTTCC TGGCAGGTGC CATCGTGCTG
CTGCTGGGCA TCATGACCGT CATCGGCACG TTCCTGTCCG ACATGCTGCT GCTGTGGATC
GACCCGAGAA TCCGTCTGGA GGGACGTTCA TGA
 
Protein sequence
MVSYLVRRLF MAIVTMVAIS VLSFAIIQLP PGDYITTYIA QLAADGTSLS DAEVLALREQ 
YGLDQSFLVQ YLRWIASVLH GDFGMSMEWR RPVSELIGER LWLTMAVAVA AILLTWALAL
PIGIYSAVRR YSVADYAFTI VGFIGLAVPN FLLALALMYF GYKFFGINIG GLFSPAYVDA
PWSLARVWDL IKHLPLPAIV LGTAGTAEMI RVMRANLLDE LHRPYVKTAR ARGLDERRVI
LKYPVRVALN PFVSILAYLF PYIVSGSIIV SLVLGLPTVG PLLLRALLAQ DMFLAGAIVL
LLGIMTVIGT FLSDMLLLWI DPRIRLEGRS