Gene Meso_4341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_4341 
Symbol 
ID4178825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008242 
Strand- 
Start bp244108 
End bp244779 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content60% 
IMG OID638059236 
ProductVirB8 
Protein accessionYP_665958 
Protein GI110347140 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3736] Type IV secretory pathway, component VirB8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0342732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGACGA CAGACAGTCT CAAGGAATAT TTCGACAAGG CGCGCCGCTT CGATCAGGAC 
CGGATGGTCT CCGCCGAGCG CTCAAAACGA CTCGCCTGGT TCGTCGCCAT CGTCGCCAGC 
GTGCTGGCCT GCGTCTCGGT TGCCGCCGTG GTCGCGCTGA CGCCGCTCAA GACGGTCGAA 
CCCTTTGTCA TCCGCGTCGA CAATTCGACC GGCATCGTCG ACGTCGTGTC AGCCATGGCG 
TCGACCGCCG GCAACTATGA CGAGGAGGTC ACCAAATATT TCGCCGCCCG TTACGTCCGG 
GCACGCGAAG GCTATGTCTG GTCGGAAGCG GAAGAGAATT TCCGGACCGC ATCGCTGATG 
TCGAACGCGG CTGAGCAGCA GCGCTTTGCG GCCGCGTATC GCGGCGGCAA TCCGGAATCT 
CCGCAGAATG TCTATGGGCG CTCGGCGACG TCCCGTATCG GGATCAAGTC AATCTCACTC 
ATCAACAGCA ATGTCGTTTC AGTCCGCTAC ACGCGGACAA TCACACGCGG CGAAGATGTC 
CGCACAACCC ATTGGGTGGC AACGATCACC TATTCCTATG CCAATGCCCC AATATCCTCC 
AGCGACCGGT TGGTGAACCC GCTTGGGTTC GTGGTGAGCG AGTACCGGGC CGATCCGGAG 
GCCTTGAATT GA
 
Protein sequence
MVTTDSLKEY FDKARRFDQD RMVSAERSKR LAWFVAIVAS VLACVSVAAV VALTPLKTVE 
PFVIRVDNST GIVDVVSAMA STAGNYDEEV TKYFAARYVR AREGYVWSEA EENFRTASLM 
SNAAEQQRFA AAYRGGNPES PQNVYGRSAT SRIGIKSISL INSNVVSVRY TRTITRGEDV 
RTTHWVATIT YSYANAPISS SDRLVNPLGF VVSEYRADPE ALN