| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4169 |
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| Symbol | |
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| ID | 4178643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008242 |
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| Strand | - |
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| Start bp | 67431 |
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| End bp | 69467 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638059077 |
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| Product | TRAG protein |
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| Protein accession | YP_665800 |
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| Protein GI | 110346982 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGAT CGCTGCGTAT CTTTTACATC GGCTTCTGCC TGATCGTCGC CCTTGCCGTC
TGGCTGCTGG CCTACGGACT CGGGTTGCAG TTGCTCTATG GCGACGGTCG GATCCTGCAG
GCGATCATCA CGACAGATCC CTTCGCACCA TTCCAGCAGC TCATGGCCTA TGGGGAGAGC
AGCGTCCTCC GCACGATGGC ACTGGGCTCA CTCCTTCCAG CTGCCCTCGT CGCCTGCATA
GTCGCCTATG CGGGCCTTCG CCCGAACGCG AGCCCCCTCG GCGATGCCCG CTTCCAGACG
GTGATGTCGC TTCGGCGTGA CGGATGGTTC AGGAGGAAAG GAAAGATACT CGGCCGCTTC
GGACGCCGGA TTCTTCGCGT CGATGACGAT CGGCATCACC TGATCATCGG TCCGACGCGC
TCGGGGAAGG GGGCCTGCTA CGTCATTCCC AACGCGCTCG CTCATGAAGG CTCGATGATC
GTTACTGACC TCAAAGGGGA GATCTTCCGC AGCACCGCAG GCTACCGCAA ATTGAAGGGC
AACCAGGTCT TCCTATTCGC GCCAGGGTCG GACAAGACCC ACCGCTACAA TCCCCTCGAT
TTCATCCGGC CGGACCGCGG CGATCGCACC ACCGATATCC AGAACATCGC CGCGATCCTC
GTCCCCGAGG TCACCGAGTC CGAGAATTCG ATCTGGCAGG CGACCGCGCA GCAGGTGATG
GCCGGGGTGA TCAGCTACAT CAACGAAAGC ATCTACTTCA AAGGACACCG CAATCTCGGA
GAGGTCACAG CCTTCTTCAA CAGTGGCACC AATCTTCAGG CGCTCATGAC CCTCCTCAAG
GAACGCGAGC CCTATCTGTC GCGGTTCACC ATTGAGAGTT TCAACGCCTA CATCGCTCTG
TCCGAGCGTG CGGCCGCATC CGCGCTGCTC GACATCCAGA AAGCGCTGCG GCCGTTCCGC
AACGAGCGCG TGGTCGCGGC GACGTCGGTG ACCGACATGG ACCTGCGCGC TCTGAAGCGT
CGGCCGATTT CGATCTACCT CGCCCCCAAC GTCACAGACA TCACGCTGCT GCGACCGCTG
CTGGCGCTGT TCGTGCAGCA GACCCTCGAC ACGCTCATGC TTGAACATAT CGAGCGTTCG
GTGCCGGTCT ATTTCCTCCT CGACGAGTTC CGGCAACTCA GGAAGATGAG CGAGATCACG
ACAAAGCTGC CTTACGTCGC CGGCTACAAC ATCAAGATGG CTTTCGTGAT CCAGGACCTC
AAGAACCTCG ATGAAATCTA CGGCGAGACG TCCCGCCATT CCCTGATGGG TAATTGCGGC
TACCAGCTCG TGTTTGGCGC CAACGATCAG GTTACCGCGG AAGCTGTCTC GAAAGGTCTG
GGCAAGCGCA CCGTCCGCTA CAAGACCGAA TCCCGCACGA TCGAACTGAT GGGCCTGCAT
CGCCGGACCA AGGTCGAGCA GTTGCGGGAG CGCGACCTGA TGATGCCGCA GGAAGTGCGA
CAGATGCCGG GAGACAAGAT GGTCATCCTG GCCGAGGGGC AGAACCCGAT CTTCGCCGAC
AAGCTGCGGT TCTTCCGGAC GGCGCCATTC AGTGAGATGG AAAGGTTCTC CCAGGCAAAC
TTGCCAGATG TGCCGGCAAC AGAGTTTCTG CCGCAACGGC CGATGCCGGC CACGACCTCC
GGATATGCCG GCGAAGACAC CGATCTCGTA GAATCGGTCC AGCAGAAGGC CGAACCAGAT
GAGACGGCAA AGCTTCCCCG CCGAAGGCCC TTGGCGGCGG CCAACGCACG GGCCGGCCGG
AGCAATAGAC AAGTGTCAGC CTCTTTCACC AAGGAAGCGT CGCCGAGGGC GGGCGGTGCC
GTGAGGACAA CCCCAGTCAA GCTGGACGCG CGCTTCGCAA TGGCCGCCAG ACGATTGAAG
ACGCTTGCGA AGGCGCCCGC TAAACCTGGG AGCCAACGCA AGGCAAGCAA TTGGGCCCGG
GTTTTCGACG AGACGGTCCC TGACGAACTG GAGCTCGCTG AGGCCGAGGC GAGCTGA
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| Protein sequence | MTGSLRIFYI GFCLIVALAV WLLAYGLGLQ LLYGDGRILQ AIITTDPFAP FQQLMAYGES
SVLRTMALGS LLPAALVACI VAYAGLRPNA SPLGDARFQT VMSLRRDGWF RRKGKILGRF
GRRILRVDDD RHHLIIGPTR SGKGACYVIP NALAHEGSMI VTDLKGEIFR STAGYRKLKG
NQVFLFAPGS DKTHRYNPLD FIRPDRGDRT TDIQNIAAIL VPEVTESENS IWQATAQQVM
AGVISYINES IYFKGHRNLG EVTAFFNSGT NLQALMTLLK EREPYLSRFT IESFNAYIAL
SERAAASALL DIQKALRPFR NERVVAATSV TDMDLRALKR RPISIYLAPN VTDITLLRPL
LALFVQQTLD TLMLEHIERS VPVYFLLDEF RQLRKMSEIT TKLPYVAGYN IKMAFVIQDL
KNLDEIYGET SRHSLMGNCG YQLVFGANDQ VTAEAVSKGL GKRTVRYKTE SRTIELMGLH
RRTKVEQLRE RDLMMPQEVR QMPGDKMVIL AEGQNPIFAD KLRFFRTAPF SEMERFSQAN
LPDVPATEFL PQRPMPATTS GYAGEDTDLV ESVQQKAEPD ETAKLPRRRP LAAANARAGR
SNRQVSASFT KEASPRAGGA VRTTPVKLDA RFAMAARRLK TLAKAPAKPG SQRKASNWAR
VFDETVPDEL ELAEAEAS
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