| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4313 |
|---|
| Symbol | |
|---|
| ID | 4176103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 5185872 |
|---|
| End bp | 5186126 |
|---|
| Gene Length | 255 bp |
|---|
| Protein Length | 84 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638057350 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_663866 |
|---|
| Protein GI | 109900611 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0759] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00278] conserved hypothetical protein YidD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00601165 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAG TTAGCCAAGC GCTGCGAAAA ATCCCAATAG GTTTGATTAG ACTATACCAG
CTATGGCTTT CACCCATGCT GGGGCAAAAC TGTCGATTTC ATCCAACTTG TTCTTACTAT
GCAATTGAAG CAATAAAACA ACACGGAATC ATAATTGGTG GTTGGTTAAG TATCAAACGC
ATACTAAAAT GCCATCCGCT GCATTCTGGT GGAATCGATC TGGTGCCCGA CAAGAAGAAG
CAAAACAAGC ACTAA
|
|---|
| Protein sequence | MEKVSQALRK IPIGLIRLYQ LWLSPMLGQN CRFHPTCSYY AIEAIKQHGI IIGGWLSIKR
ILKCHPLHSG GIDLVPDKKK QNKH
|
|---|
| |