| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4281 |
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| Symbol | pyrE |
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| ID | 4176071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5150532 |
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| End bp | 5151185 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638057318 |
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| Product | orotate phosphoribosyltransferase |
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| Protein accession | YP_663834 |
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| Protein GI | 109900579 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0461] Orotate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.326591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTAGATT ATCAAAAAGA GTTTATTGAA TTTGCCTTGG GCCGTGGTGT GCTCAAATTT
GGTGAATTTA CTTTGAAGTC TGGGCGTAAA AGCCCGTACT TTTTCAATGC AGGTTTGTTT
AATACAGGCC GTGATTTGGC TAAATTAGGT CAGTACTATG CTCAGGCACT GCAAGCGTCG
AATATTGAAT ACGATTTGTT ATTCGGCCCT GCTTACAAAG GGATCCCCAT TGCAACAACA
ACCGCTGTAG CATTAGCTGA CAAGCACGAT GTTGATAAGC CTTACTGCTT CAACCGAAAA
GAAGCCAAAA CCCACGGTGA AGGTGGAAAT TTAGTGGGGA GCGCGTTAGC TGGCAAAGTG
ATGTTAGTGG ACGACGTGAT TACAGCGGGC ACGGCTATAC GTGAATCGAT GGCGTTAATC
GCTGCCCATG ATGCGAGTCT AGCGGGTGTG TTGATTGCAC TTGACCGCCA AGAGAAAGGC
CAAGGTGAGT TGTCTGCCAT TCAAGAAGTT GAGCGAGATT TTGCTACGAA AGTGGTGTCT
ATTGTTAGTC TGGCTGATCT AATCGAGTAC TTACAAACCC AAGCTTCAGC GCAACCTGAG
TTGGCTGAGC ATTTGAAAAA TATCAAGCAA TACCGTGTTG ATTATGGGAT CTGA
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| Protein sequence | MLDYQKEFIE FALGRGVLKF GEFTLKSGRK SPYFFNAGLF NTGRDLAKLG QYYAQALQAS
NIEYDLLFGP AYKGIPIATT TAVALADKHD VDKPYCFNRK EAKTHGEGGN LVGSALAGKV
MLVDDVITAG TAIRESMALI AAHDASLAGV LIALDRQEKG QGELSAIQEV ERDFATKVVS
IVSLADLIEY LQTQASAQPE LAEHLKNIKQ YRVDYGI
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