| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4262 |
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| Symbol | |
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| ID | 4176052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 5128922 |
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| End bp | 5130385 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638057299 |
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| Product | hypothetical protein |
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| Protein accession | YP_663815 |
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| Protein GI | 109900560 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TAATAATAAG TTTTGCGGTT TTACTATTGG TACTGTGTGG CGTTTTATTT
TACCGCGCTA GCAGCTTTTT TGAGAATAAA CAGTACGTAG TCGATGCGCC TATGATTCCA
GTCACTGTTG ATGAGCAAGC CGTGTTATCT CGGTTCAGCA AAGCGATTCA GATCCCTACT
ATTTCCTTTG ACGATCGCAG TCAATTTGAC CAAGACGCGT TCATTGCCTT TCAAGATTAT
CTAAAAGAGA ATTTCCCACG GGTTCATCAA CACGCTGAAC TTACAGTCAT CAATGATTTC
AGTTTGCTTT ACCACCTAAA GGGCAGTGAC CCAAGCCTAA AACCTGCGCT ATTTATGGGC
CATATGGATG TAGTACCGGT CGACGAGGCA ACAGCAAACC AATGGGAGCA AGCACCATTT
AGTGGCAAGG TGGTTGACGG CACCATTTGG GGCCGAGGCA CAATAGACGA CAAAATCAGT
GTGGTAGCCC TGATGGAGTC AATGGAGATG CTGCTTGAAC AGAATATTCA GCCTAAACGC
AGCATTTACT ATGCATTTGG TCACGATGAA GAAGCCGGCG GGAAAGATGG CGCGCGCAAA
ATTGCTGACT TTCTAGCGAC ACAAAATGTC GAGTTCGAAT TTGTACTAGA TGAAGGCGGC
GTAGTCACCC AAGATATGCT GCCCGGTGTG ACCGAGCCTG TTGCCGTTAT TGGTATTGCG
GAGAAAGGCT TCGTTAATTT ACGTTTGACG GTTAACGCGC CAGGAGGGCA TTCTTCACAA
CCTCCTGAAC ATACCGCTGC CGGTATTCTC GCCCAAGCTA TTGTAAAAGT AGAAGCAGCC
CCATTTGCTA CAGACATGCG CTTTATTCAA GATACCTTTA AGCACATAGG TTTCGCGACC
GATTTAGCCA CTCGATTGCC TATGTCTAAC TTGTGGCTGT TTTCGCCAGC AGTTGAAAGT
ATGATGCTAA AAAGCCCCAG TTCAGCTGCG AGTATTCGCA CCACTACGGC GGTCACTATG
CTCAAAGGCA GCTCTAAATC GAATATTTTG CCTACTGAAG CACAAGCAGT GGTGAACTTT
AGAATTTTAC CCGGCGACAC CATAGACAGC GTCACGCAAC ATATCACTCG CGCCATAGAC
GACCCCAGAG TCAACATTGA GGCCTTTATG ACTAATGAAG CATCACCGGT ATCGTCCACC
GAAAGCTACG GTTATAAATT GATTGAGCAA ACTATTCGTC GCTTAGATCA AAACCTGCTT
GTCGCGCCGT ATTTAGTCCA AGGCGGAACG GATGCCTCTA ATTTCTATGG ACTATCGGAC
AATGTATATC GATTTATGAT GGTGCGCCTT AACCCGAAAA CCATGAAACG TTTTCACGGA
GTAAATGAGC AAATATTGGT TAAAGATTAT ATCCAAGCGA TTCAATTTTA TTACGCAATG
GTTGAGCAGG CGGCACAAGG CTAA
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| Protein sequence | MKKIIISFAV LLLVLCGVLF YRASSFFENK QYVVDAPMIP VTVDEQAVLS RFSKAIQIPT
ISFDDRSQFD QDAFIAFQDY LKENFPRVHQ HAELTVINDF SLLYHLKGSD PSLKPALFMG
HMDVVPVDEA TANQWEQAPF SGKVVDGTIW GRGTIDDKIS VVALMESMEM LLEQNIQPKR
SIYYAFGHDE EAGGKDGARK IADFLATQNV EFEFVLDEGG VVTQDMLPGV TEPVAVIGIA
EKGFVNLRLT VNAPGGHSSQ PPEHTAAGIL AQAIVKVEAA PFATDMRFIQ DTFKHIGFAT
DLATRLPMSN LWLFSPAVES MMLKSPSSAA SIRTTTAVTM LKGSSKSNIL PTEAQAVVNF
RILPGDTIDS VTQHITRAID DPRVNIEAFM TNEASPVSST ESYGYKLIEQ TIRRLDQNLL
VAPYLVQGGT DASNFYGLSD NVYRFMMVRL NPKTMKRFHG VNEQILVKDY IQAIQFYYAM
VEQAAQG
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