Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_4257 |
Symbol | |
ID | 4176047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 5124576 |
End bp | 5125223 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638057294 |
Product | OmpA/MotB |
Protein accession | YP_663810 |
Protein GI | 109900555 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAAGA AACTAGTTAT TGGTGTAGCA CTATCGGGCC TAGTATTAAG TGGTTGCGCG TCGAATTCTA TGGGCGGCGC ATCGAATACA CAAAAGGGTG CAGGCATCGG CGCTATCGTA GGTGCGTTAA TTGGTAAAGG CACTGGTGAC AACGATAAGA GCCGTTATGT TTGGGGGGCA GCGGTAGGTG CACTAGCAGG TTCAGCCATT GGTAATTACA TGGATAAGCA AGAGGAGGAG TTCCGTGAGG AGCTTGCCGA CAGCGGTGTA GAAGTATACA GAGAAGGTGA TACTTTACGT CTATACATGC CTGGCAGCAT CACATTCAGT TCTGGAAATG CCAGCGTTGA CAGTAGCTTT TATCCTGTAC TAAAGGATGT TGCTTTGGTG ATAAACAAGT ATGAAAAAAC TACATTGATG GTAGAAGGGC ATACTGATAA TACTGGCGCC GATGACATGA ACCAGCGTTT ATCTGAGGCA CGAGCAAACA GCGTTAAAAA TTATTTAGTC CAAAACGGCG TTGATAACAG ACGCGTTTCG ACCTTGGGCA TGGGCGAGTA CACTCCTATC GCAGATAATG CTACTCAAGC TGGTCGTCAG AAAAATCGTC GGGTAGAGCT GAAAATTATT CCGATGAGTA AGAATTAA
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Protein sequence | MYKKLVIGVA LSGLVLSGCA SNSMGGASNT QKGAGIGAIV GALIGKGTGD NDKSRYVWGA AVGALAGSAI GNYMDKQEEE FREELADSGV EVYREGDTLR LYMPGSITFS SGNASVDSSF YPVLKDVALV INKYEKTTLM VEGHTDNTGA DDMNQRLSEA RANSVKNYLV QNGVDNRRVS TLGMGEYTPI ADNATQAGRQ KNRRVELKII PMSKN
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