| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4239 |
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| Symbol | |
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| ID | 4176029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 5102807 |
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| End bp | 5103784 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638057276 |
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| Product | cytochrome oxidase assembly |
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| Protein accession | YP_663792 |
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| Protein GI | 109900537 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAAAT TGGTGTTGGC AGGCCTTATT CTTGCCATAA CTGTGATTGT GCTAGGTGCA
TACACGCGGT TGACCGATGC AGGGCTGGGA TGTCCAGATT GGCCAGGTTG CTACGGACAC
TACAAAGTGC CCGTAGCGCA AGAGCAGATA AATGCTGCAG AACTGGCGTT TCCTGAACGA
CCTTTAGAGC CCCAAAAAGC GTGGAACGAG ATGATCCATC GCTACTTCGC GAGTGCGCTA
GGCTTACTCA TCTTGATCAT CTTTGTGGTG AGCATAGTAA AGCGTGCTTA TCATCGACCT
ATTAAGTTAC CGTTTTTCCT GCTGTGCCTG GTCATATTTC AAGGCATGCT AGGTATGTGG
ACCGTCACCC TTAACCTTTT ACCTATTGTC GTTATGGGTC ACCTTTTAGG CGGCTTTGCC
GTGTTGTCAT CGTTGTTTCT GCTTTACTTA CGCCTTCTAC CATATCGCAT ACCAGGTGGT
GATCAGCAAA CCCGACGTCT AGCAAAGTTT GGCTTGATAG GGATCGCCAT CCTTATAGGC
CAAATAGCAT TAGGCGGCTG GACATCAGCA AATTATGCGG CGCTAGCTTG TACCGAAATG
CCAATTTGCG AGAGCAACTG GTACGAGCGC CTAGATTTTA TAGGAGCTTT TAGCTTGCCA
GAAGCAGATA ACTACGAGTA CGGGGTGCAC GATTATGCCC AGCGTATGAC CATGCATATA
GTGCACAGGG CTGGCGCGCT AATTACGTTT ATTTATCTGT GCTGGTTGGC TATTCGCATT
TACGGGGTAG CAAGCTCTGG ATTGTTAAAA AAAATTGCCA CTATCATGGT ATTGGTACTA
GGCATTCAGG TCATTTTGGG TGTCAGCAAT GTGGTATTCA GCCTGCCGGT CGGTGTGGCC
GTTATGCATA ATGCCGTTGC CGCTACACTA CTACAAATTT TGGTGTTACT TAGTTACACC
CTCTATCGCA AAACATAG
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| Protein sequence | MRKLVLAGLI LAITVIVLGA YTRLTDAGLG CPDWPGCYGH YKVPVAQEQI NAAELAFPER
PLEPQKAWNE MIHRYFASAL GLLILIIFVV SIVKRAYHRP IKLPFFLLCL VIFQGMLGMW
TVTLNLLPIV VMGHLLGGFA VLSSLFLLYL RLLPYRIPGG DQQTRRLAKF GLIGIAILIG
QIALGGWTSA NYAALACTEM PICESNWYER LDFIGAFSLP EADNYEYGVH DYAQRMTMHI
VHRAGALITF IYLCWLAIRI YGVASSGLLK KIATIMVLVL GIQVILGVSN VVFSLPVGVA
VMHNAVAATL LQILVLLSYT LYRKT
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