| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4215 |
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| Symbol | |
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| ID | 4176004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 5075922 |
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| End bp | 5076731 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638057251 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_663768 |
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| Protein GI | 109900513 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATC CAAATAGCTT AATTGCCCAC CTAATCGAAT TACGTGGCAG AGTGTTAAAA
GCAGTATTGA GTGTGTTTGT GGTGTTTTTG TGCTTGGTCT ATTTCGCCCA AGACCTATAC
CACTGGCTCG CGACCCCTCT GCTTGACACC TTGCCAGATC AAGCAGAAAT GATTGCCACG
GACGTTGCAT CACCCTTTTT TGCACCGTTT AAACTGACCT TGGTGTTGTC GTTTTTTATC
GCAATCCCTG TTGTGCTGTA TCAAATTTGG GCCTTTATAG CCCCCGGTTT ATACCGTAAT
GAAAAACGTT TAGTGGCGCC TCTGTTGTTT TCCAGCACCT TGTTGTTCTA TTCGGGTATG
GCGTTCGCCT ATTATGTGGT GTTCCCTCTT GCTTTTGCTT TCTTCACTGG TGTCGCCCCT
GAGGGCGTGA CAATTAACAC TGATATCAGC AGTTATTTAG ATTTTGTGTT GAAGATCTTT
TTTGCCTTCG GTTTATCGTT TGAAATCCCC GTGGCAATCG TCTTGATGTG CTGGACGGGT
GTCAGCACTC CAGATTCATT GCGAGCAAAG CGGCCTTACG TCATTGTCGG TGTGTTTACG
TTAGGTATGC TGCTGACTCC GCCTGACATC ATTTCGCAAA CATTACTGGC GATACCCATG
TGGATATTGT TTGAAGTCGG CATTTTAGTC GGCAGCATGT ACGTCAAACG CAAAGAACAC
GCTGACGATG ACGAGCACAG CGACGAGCCG ACTGAAATGC GAAAAGAAGA ACAGACAGAG
CAAGAAAAGA AGGAACAGGA ACAATCATGA
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| Protein sequence | MSDPNSLIAH LIELRGRVLK AVLSVFVVFL CLVYFAQDLY HWLATPLLDT LPDQAEMIAT
DVASPFFAPF KLTLVLSFFI AIPVVLYQIW AFIAPGLYRN EKRLVAPLLF SSTLLFYSGM
AFAYYVVFPL AFAFFTGVAP EGVTINTDIS SYLDFVLKIF FAFGLSFEIP VAIVLMCWTG
VSTPDSLRAK RPYVIVGVFT LGMLLTPPDI ISQTLLAIPM WILFEVGILV GSMYVKRKEH
ADDDEHSDEP TEMRKEEQTE QEKKEQEQS
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