| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4192 |
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| Symbol | hslU |
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| ID | 4175981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 5049047 |
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| End bp | 5050378 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638057228 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_663745 |
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| Protein GI | 109900490 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAA TGACCCCAAG AGAAATCGTC CACGAATTGG ACCGCCACAT CATTGGCCAG
AAAAATGCTA AGCGCGCCGT ATCAGTTGCA CTGCGTAACC GCTGGCGCCG CATGCAGTTA
AGTGGTGATC TTCGCCAAGA AGTCACCCCG AAAAACATCT TGATGATCGG CCCTACCGGT
GTGGGTAAAA CTGAAATTGC TCGACGCCTA GCCAAGTTAG CTAACGCGCC TTTTATCAAG
GTTGAAGCCA CTAAATTCAC CGAAGTGGGT TACGTGGGCA AAGAAGTTGA AACGATCATT
CGTGATTTAG CTGACATCGC CGTGAAAATG GCCAAAGAGC AAGAAACTAA AAAAGTAAAA
TACCGCGCTG AAGAAGCCGC TGAAGAGCGT ATTTTAGACG TGTTATTACC GCCAGCTGAA
AATCAGTGGG GCGAAAAAGA GCAGAACGAA GATAAAGGGA CGCGCCAAAC CTTCCGTAAA
AAATTACGCG AGGGTCAACT TGACGACAAG GAAATCGAAA TCGATGTTGC TTTGCCTCAA
GTCGGCGTAG AGATTATGGC GCCTCCGGGT ATGGAAGAAA TGACCAATCA ACTTCAAGGC
ATGTTCCAAA ACTTATCTGG CTCACAAAAG AAAAAGAAAA AGTTAAAGAT CAAAGAAGCC
TTCAAGTTAT TGATCGAAGA AGAGGCAGCG CGCCTAGTCA ACCAAGAAGA CTTGAAAGCC
AACGCCATTG AATCACTCGA GCAAAACGGC ATAGTGTTTA TCGATGAGAT AGACAAAATC
TGTAAGCGCG AAGGCTCTAA CAGTGGCGGT GATGTATCAC GTGAAGGCGT ACAGCGTGAC
TTGTTACCAT TAGTCGAAGG CTCAACCGTG TCGACTAAAC ACGGCATGGT TAAAACCGAC
CACATCTTGT TTATTGCTTC GGGTGCATTC CAAATGGCTA AGCCATCAGA CTTGATCCCT
GAGCTACAAG GTCGCTTACC CATTCGCGTT GAATTAGAAG CCTTAACCGC TGGAGATTTC
ATTCGCATTT TGACCGAGCC AAATGCTTCG TTGACTGAGC AGTACATCGC TTTGCTCAAG
ACAGAAGGCG TAGACGTTGA TTTCACTCAA GATGGTATTG AGCGCATTGC TCAAGCTGCA
TGGCAAGTTA ATGAACGTAC TGAGAATATT GGCGCACGTC GTTTACACAC TGTGATGGAG
CGTCTGATGG AAGAGATTTC ATTTGATGCA TCAGAAAAAA GCGGCGAGCA GCTAACGGTT
GATGCCAAGT ACGTGAACGA TCACCTAGAA ATGCTGGTGG AAAACGAAGA CTTGAGTCGC
TTCATTTTAT AA
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| Protein sequence | MSEMTPREIV HELDRHIIGQ KNAKRAVSVA LRNRWRRMQL SGDLRQEVTP KNILMIGPTG
VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVETII RDLADIAVKM AKEQETKKVK
YRAEEAAEER ILDVLLPPAE NQWGEKEQNE DKGTRQTFRK KLREGQLDDK EIEIDVALPQ
VGVEIMAPPG MEEMTNQLQG MFQNLSGSQK KKKKLKIKEA FKLLIEEEAA RLVNQEDLKA
NAIESLEQNG IVFIDEIDKI CKREGSNSGG DVSREGVQRD LLPLVEGSTV STKHGMVKTD
HILFIASGAF QMAKPSDLIP ELQGRLPIRV ELEALTAGDF IRILTEPNAS LTEQYIALLK
TEGVDVDFTQ DGIERIAQAA WQVNERTENI GARRLHTVME RLMEEISFDA SEKSGEQLTV
DAKYVNDHLE MLVENEDLSR FIL
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