Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_4179 |
Symbol | |
ID | 4175968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 5031398 |
End bp | 5033572 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638057215 |
Product | hypothetical protein |
Protein accession | YP_663732 |
Protein GI | 109900477 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000170213 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAAC ACAATAAAAT AGTGCTGTTA TTAAGTGGTC TAGGTTTAGT GGGAAATGCA TATGCTGTCG AAACTCCCCA GAGCCAAGTG CAAGAAACAT CTAGCTTTTA TGAGGATGAC GCTGAGTTTA ACCAAGCCGC TGCAGGATCT GAAGAAGGAT GGGGTTGGCA ATTAAAAACA TCGGTGTCAG CCAGTATACA GTGTGATACC AATTCGGATT GTGGAGGTGG GGGACCAATT GACCCGCCAC CGGATGTCGC GCCATCAGTA CCAAAAAGTA TTGCGGTACT TCGAACCAAA GGAAGTAATT CCGTAGAAGT AAAGTGGCAA GGTGGCAACG CAGGCCGAGG ATCTAATTTT CACTACGAGT TGCGTCAACA ATATAAAGAT GAGATACCAC AAGATAGTGA AACCCAAACC CAGACGGCAC CGTCAAGCAC CGTTTCCGTT GGTAATAACC TTAGCTCTAT CCAAAATCCT GGTGCCGACA AAATCGTCAA ATATGCGGTT AGGGCATGCA ATAGCGTTGG TTGTAGCCCG TACAAAACAT CGCAGTATTA TTCGATTAAT GCGAACTATG ATAATGGGGG CGCGGTAACC AAACCATTAG AAAGTGTGAG AACAAATTCT CAACTAGCTC GCAAAGGAAC CTATTCAGCC TTAAGCACAA ACCAAACAGA ACAAGAAACT GCACTCGCTG CGCTGAGCAA AGGCTACGAT GCACTCAAGG GTGAGGTGTA CGGGAATTCA TGCTGGGATC TCTCAGGCGC CGCTCAACTT GATTCCGTTC AGTATATTAA CGATCAAAAA TACTCCTTCA GCCAAGTAGA TACTTACGAA TCTCTCGCGA CAACACTAGA TGTTAAGCGT TCAGGAGGCG GTTCGATATC GTTTGGTGGT TTTTCTATCG GGGGGTCAGG AAGCTCTTCG TTATATAGCG AAACATCCAA GGTTACTGAG AGTTCAGTTA TCGTTTCGTC GTTTATCGAT AAACAAAATC GATATCAAGC AAAACAAGCC CTCACTTTAG GTATGTCTAC TCCTTATGTT AACTACTTAG TGAATAATCA GCCAAAAGAG TTTCGTAAAT TCTGTGGGGA CAAATTCATT GATACAGTTA CCACAGGCAG AAAAATTCTA TTTACGATCC GTGTGGTAAG TGAAAAAAGT AGTTACAGTG AAATAAAGAG TAAAACTCTT GAGTTAAAAG CATCGCTGGA AAGTTATAGC GCGGATGGCA ATTTTACCTC CAGTGAAGCG AGTAGTTTAG AGCAAGAGTT TGACGGCTAT ACATTCGACA TTATTGGTAC ACAAACCGGT GGTTCAGATT CCGGTAACCT CCTTCGGCTT AATAGCATCA CGGAATATAT GACTGTGCTT ACCAGTTTTG CCAATAGCAA TGATGAAGAT TTAGTCAATA TAGAGTCGAC AGAACGGGAT TACCCTATAC CGAGTGCTTT AGCTGGCACG AGCCATTTTG ACGTGTTTTC TGACTACACT GAGTACCGTG ACATATTACA GACTTGGGGA CGGTTGGACA GTCAGCTGGA GCGACGTTGT TGGATGTTAG ATTTGAATGG AATTGACCCA GACGCAGTAG GCCAAATTGA AGAGGCAATG GGGTTAAGTT TCTACGAAGG AAACGTTAGC CAAAGAGATT TATGTGACTC TGCGAAAGAT ATGGTCGACC GCTTCGTAAA CTATTGTTCA AATCAGGGTG AGTGGAATAA GTGTTTTCTT CCCAATTCTT CGAACTGTAT CGATTCTATT AATAACGGAT TGTGTATGCA GCGTCCTGAA CTCATAAGTT TCAAAGGATT TAGACTTGAA CAGGTACGTT TAGATTTATC CAAAGGGGGT TGTTTGTTTA GGTGCTATAA ATCTAAGTCA GTACAACAAT GTTTCACGAA TACCGACATC ATTCCTGACT TCAGTCGCAA TGCAGTGATC ACGAGTAGCT ACTCGCCTTC TCCAGTTAGT GGTTTAGTTG TCACCGTTGA CCGCTCGTGG AATGTCAGTA GCGCTAGTAA TAGCATCACT AAGGTAAATG GAAACTACTG CTTAAAGGCA AAAGCTGAAG TCTTCGGAAA AGGAGGATTT GGCGCTGGGG GAAGATATGA GTCGAACAAT CAGATGTTCG GATTTCAAAC CCAAACTTTA GGTTATTCAC TCTAA
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Protein sequence | MLKHNKIVLL LSGLGLVGNA YAVETPQSQV QETSSFYEDD AEFNQAAAGS EEGWGWQLKT SVSASIQCDT NSDCGGGGPI DPPPDVAPSV PKSIAVLRTK GSNSVEVKWQ GGNAGRGSNF HYELRQQYKD EIPQDSETQT QTAPSSTVSV GNNLSSIQNP GADKIVKYAV RACNSVGCSP YKTSQYYSIN ANYDNGGAVT KPLESVRTNS QLARKGTYSA LSTNQTEQET ALAALSKGYD ALKGEVYGNS CWDLSGAAQL DSVQYINDQK YSFSQVDTYE SLATTLDVKR SGGGSISFGG FSIGGSGSSS LYSETSKVTE SSVIVSSFID KQNRYQAKQA LTLGMSTPYV NYLVNNQPKE FRKFCGDKFI DTVTTGRKIL FTIRVVSEKS SYSEIKSKTL ELKASLESYS ADGNFTSSEA SSLEQEFDGY TFDIIGTQTG GSDSGNLLRL NSITEYMTVL TSFANSNDED LVNIESTERD YPIPSALAGT SHFDVFSDYT EYRDILQTWG RLDSQLERRC WMLDLNGIDP DAVGQIEEAM GLSFYEGNVS QRDLCDSAKD MVDRFVNYCS NQGEWNKCFL PNSSNCIDSI NNGLCMQRPE LISFKGFRLE QVRLDLSKGG CLFRCYKSKS VQQCFTNTDI IPDFSRNAVI TSSYSPSPVS GLVVTVDRSW NVSSASNSIT KVNGNYCLKA KAEVFGKGGF GAGGRYESNN QMFGFQTQTL GYSL
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