| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4161 |
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| Symbol | |
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| ID | 4175950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 5006000 |
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| End bp | 5009026 |
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| Gene Length | 3027 bp |
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| Protein Length | 1008 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638057197 |
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| Product | hypothetical protein |
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| Protein accession | YP_663714 |
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| Protein GI | 109900459 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000881228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACAC AATCTAGAAA TTTCATACAA CAACGGATTT ACCGTGCCAT GCAAGGTGCA
TGGAACAATC GCGCAACCAC TCTCTCAGCT GTACTACTAG CAAGCTCTCT AGCTGGTGCT
CCTGCAGCAT TAGCACAGCA AGCCGGTGGC ATTAAAGGTA AGGTTGAAAC GCAAGCGACT
GATATTTCGG TAAACGATGT CACTGTCACC GCATCAAGTA ACGTGATGCC AAAACCTAGA
ACGGTTAAAA CAAAAGCGGA TGGTAGCTAT GTTTTACCGG CTCTTAAGCC TGGTAAATAC
ACCCTGACCT TCACCTCTGC TGATGGCACA GTTCGTCAAA CCCAAGTCGA CGTATTGTTA
GACCAAACAT CTAACGTTGA TGTGGCATTT GAAGCAGCAC CTGCTGATAG CACCGAGGTG
ATTCAAATTA TCGGCTCTCG CATCAGCCGC GAAGGAGACT CTTCATTAAC TAATTCTTTG
GGCGAAGACG TTTTATCTCG CGTACCCATT GGTCAAGACT ACCGCTCTTT GCTCGCCATT
ATTCCTGGTG TGCAGTATTC AGAAAATGCC ACTCTTGGCC CTAACTCTGG CGGTTCTGGC
CGAGATAACA AATACGGTTA TGATGGGGTA GACGTATCAT TACCCATGTA CGGTAACCTT
GCATCTGAAC CATCAACCCA AGATATTGCG TTCGTATCAA TCGACCGTGG GGGCGCTAAA
GCAATCGGCT TTAACCGCGC AGGTGGTTTA GCAATCAACA CCTTGTCTAA ATCAGGCACT
AACGAGTTTC ATGCCAGTGT AGAATATCGT ATCGAGCCTG CAAGCTTATC CGCCGATCGT
GATACAACTG AAGGTACAGA TGCGAATTTT GATGAAGACA AAACGTGGAT GAGCGCCAAT
GTTAGCGGCG CATTGATTGA AGATGAATTG TATTTTTATG GTTCATACTT CGGCCCTGAG
ATAACACGCG ATAATAAAGA AACGGCGTAT GGACCGACCA AGCAATACGA AAGTGATCGT
GATGAATATT TCGGTAAATT AACTTGGGCA CCTACCGAAG ACTTATTGTT TAACGTCAGC
TACAGAACCT CTGATAAAGA CGTTGTCGGC GACTCAGTAG GAACCAAGTC TACTGATTCC
ACTTCAGAAG GTAGCTCGGT ATCACAAGAC ATTTTTACGT TCGACGGTTC ATATATTATC
GACGACTATA CGACGTTAAC CTTCCAATAC AGTGATTTTA AGAACGAGAA CTCTAGCCGC
CCTGATACTA ATTTCTCAGG TGTTATCCCA TCTATTGGTG GCACGCTTGA TGTGAATAAT
CTTGATCAGC AAGGTTCATT TACCGTACCG AACGTTAAAA CAGATGAAGG TTTTGATGCA
GAAACAGCTC AAGCATTAAT CGATACCTAT GGTTATACCG ATGATGCAGG CGTATTAACG
GGTGGCGGTA ATATTGGTGG CGCTTCACTT ATTAATAATC AAGATTTCTC TCGTAAGAGC
TTTGAAGTTG CTCTTGACCA CGAAATGGAG CTAGGCAATA CCGTTCACAA TATTCATATT
GGTGGACAGT GGAAAGAAAG CGAAGAAGTG CTCACTCGAC TGTCAAATGG TTGGGGTTCA
ATCAGCTATA ACGGCGGGTT GGGTGTAGAT ACCGACTTTG AAACAGACGA AGCTATCTAT
TACAGCGCAA CAGTATATTC CAACAGTTTA AATGGTGAAG AAAACTTAAA TCCGCTAACG
TCAACATCAG AAGTCATCAA CATTGAAGTG AATGATACCA TTGAGCACGG TGACTTCACT
TACAACGTTG GTTTCTTGTT TAGCAACGAT ACTTTGTACG GACAAGGTCT AAGAGAAAAC
TCAGCGAATG CATCAGGTTA CGAAGTCGCT CCTGGCAACA AGTACAAAAT GTATGAGCTT
GATTTTATGG ACATGATCCA ACCTAGACTC GGCATCACTT GGGCCTATAA CGGTCGCGAT
ACCGTGTTTG CTAACTTCGC GAGTTATAAC CCAGATACTA CCTCACTAGC CCGCGCGGCC
TCATGGGATC GCAACAACCA ATCAACCCAA GTAGTTTATT TTGATGCGGA CGGTGCGTTT
ATTGGTAATA CCGAAGCAAA CGGTTCATCA GGTAAGTTAT TCCAAGATGA CATGGATGCA
CGTCGCACGG ACGAAATCAC TATTGGTATG ACGAAATACA TATCAAACGA ATTCTTCGTT
CGCACCCATT TACGTCAGCG CGAGGCCTCA CATGCGTGGG AAGATCAGCC TAACAATGCC
CGCACTTATG GCGATTACGG CCCGTTTGGT GGCGTACCTG AAAACTTGCG CGATAAAGGC
TTGTTTATTC CTGATTTAGC TGAGCAATAT TCCAGCATGG GACTATCTGC AAGTGACGGT
AGCTATGTTA TTGCCGAACT AGATGGCGCT GAAAACACCT ACTACGAGTG GAGCATCGAA
GGTGATTACA CCGGCGACAA TTACTACTTG AACGTGTCTT ATGTATGGAG CCACTACTAC
GGTAACTATG ACCAAGACGT CACTAGCACA GCGTCTGACG GTAACTTGTT TGTTGGCTCA
TCTAACTTAG GTGATGGTCG CGGTCGCATG TTGTGGGATG GCAAGTCAGG CACTTTAAAT
GGTGACCGTC CTCATGTATT AAAAGCATTG GGTTACTACA CAACAGATTG GAACGCTGAC
ATCGGTTTTA ACTTTGTCTT CCAATCTGGC GATGTTTGGG AAGAGTGGGA CGGTGGCGCT
TATGGTTATT CAAGCTCTAC TATTCGTTAC TCTGAACCTG CTGGCAGCCG TCGTGAATCA
AGCCATTGGC AGTTAGACTT AAACTACGCC CAAGCCTTCA ATATTACCGA AGACTTAGAG
CTTCAGTTTA AAGCCGATGT GTTTAACGTT TTCGACAGAC AGACGGGTTA TAACTATCAA
CCCATTCTTT CTAGCGCCAC CTTTGGTGAG GCACGAAACT TAATTAACCC TCGCCGTGTT
CAACTTTCGG TTAGCCTAAA CTACTAA
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| Protein sequence | MATQSRNFIQ QRIYRAMQGA WNNRATTLSA VLLASSLAGA PAALAQQAGG IKGKVETQAT
DISVNDVTVT ASSNVMPKPR TVKTKADGSY VLPALKPGKY TLTFTSADGT VRQTQVDVLL
DQTSNVDVAF EAAPADSTEV IQIIGSRISR EGDSSLTNSL GEDVLSRVPI GQDYRSLLAI
IPGVQYSENA TLGPNSGGSG RDNKYGYDGV DVSLPMYGNL ASEPSTQDIA FVSIDRGGAK
AIGFNRAGGL AINTLSKSGT NEFHASVEYR IEPASLSADR DTTEGTDANF DEDKTWMSAN
VSGALIEDEL YFYGSYFGPE ITRDNKETAY GPTKQYESDR DEYFGKLTWA PTEDLLFNVS
YRTSDKDVVG DSVGTKSTDS TSEGSSVSQD IFTFDGSYII DDYTTLTFQY SDFKNENSSR
PDTNFSGVIP SIGGTLDVNN LDQQGSFTVP NVKTDEGFDA ETAQALIDTY GYTDDAGVLT
GGGNIGGASL INNQDFSRKS FEVALDHEME LGNTVHNIHI GGQWKESEEV LTRLSNGWGS
ISYNGGLGVD TDFETDEAIY YSATVYSNSL NGEENLNPLT STSEVINIEV NDTIEHGDFT
YNVGFLFSND TLYGQGLREN SANASGYEVA PGNKYKMYEL DFMDMIQPRL GITWAYNGRD
TVFANFASYN PDTTSLARAA SWDRNNQSTQ VVYFDADGAF IGNTEANGSS GKLFQDDMDA
RRTDEITIGM TKYISNEFFV RTHLRQREAS HAWEDQPNNA RTYGDYGPFG GVPENLRDKG
LFIPDLAEQY SSMGLSASDG SYVIAELDGA ENTYYEWSIE GDYTGDNYYL NVSYVWSHYY
GNYDQDVTST ASDGNLFVGS SNLGDGRGRM LWDGKSGTLN GDRPHVLKAL GYYTTDWNAD
IGFNFVFQSG DVWEEWDGGA YGYSSSTIRY SEPAGSRRES SHWQLDLNYA QAFNITEDLE
LQFKADVFNV FDRQTGYNYQ PILSSATFGE ARNLINPRRV QLSVSLNY
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