| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4158 |
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| Symbol | |
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| ID | 4175947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4999589 |
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| End bp | 5001055 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638057194 |
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| Product | RimK-like ATP-grasp |
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| Protein accession | YP_663711 |
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| Protein GI | 109900456 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.530195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAA CGATTGTTGT GGTGGATAAT GCCGAAGGCT TCCCCGAGCT GGACGCGAGC
GTTATTGATT TCGCCCAGTA CCTTGCCGAC TACCCTAAAG TAGGCGAGCC TAAAACCCGT
ATTATTAACC TATGTGACAC AGATAAATAT TTGAGTCAGG GTTACTACTG CTCTCTGTTG
GCTGAAGCAC GTCAACACAA GGTGTTACCA AGCGTAAACA CCATTAATGA TTTGAGTGAA
TCCCTGACTG ACCAAAGCAA TGTGCTGACC CCAGTGCCTA AATATATGAG CACGGACTTA
TACGCCCATA TTGACGATGA GTTACCCCAA GAAATTTTAG TGTTTTTCGG CTGGTCGCAA
AATGAGCGCC ACAAACGTAT TGCTAAACAC GTGTTTGAAC GTTTTCCTGC GCCTATTTTG
CGGCTCACTT TTAGCCGCGA CGAGAAAGGC TTGAGCGTAC AGCCAAAAGC CTTGGGTATC
CGTGAGATTG ATTCAAACTT GTGGCCGCTA TTTGCTGAGC GTTTAGAGCA TTTTACTCAG
AAGTATTGGC GTAGCCGTAG CAACAAAAAA CGTTTCCGTT GGGACATGGC TATTCTGGTA
AACCCAGAAG AGAAAACCGC GCCTAGCGAC AGCAAGGCAA TCCAAAACTT TGTGAAAGCA
GCAGAACAGG TAGGTATTAA TGCAGAGGTG ATCACCGCCA AACAAGGGCC CATGATCAGT
CAATTCGATG CATTGTTTAT TCGTGAAACG ACCGCGATAA ACCATCACAC CTACCAACTT
GCCCGCAAAG GTGAGCAAGA AGGGTTAGAA GTGATTGATG ATGCAACCTC TATTTTGCGT
TGCTGCAACA AAGTGTTTTT GCATGATGCG TTTAGCTACA ACAAAGTGCC GTCACCGAAG
AGTCGTTTTG TGTCTAACTC GAGCGACCAA ACCTGTGAGC TGCTAGAAGC TGAGTTTAAC
TACCCTATGG TGCTAAAACT TCCTGAAAGC TCGTTCTCGA TTGGCGTGTT TAAAGTTGAA
AACTTGGTTG AGCTAAAACT TAAGTTGGTT GAAATGTTAC GCCAGTCAGC CTTAGTGCTG
ATCCAAGAGT TCGTGTACAC AGACTACGAT TGGCGTATCG GTGTGCTAAA CGGCCGAGCA
ATTTACGCTT GTCGCTACTT TATGGCGCGT AACCATTGGC AAATTTACAA CCATAGCTCG
AAGAAACACT TCTCTGGTGA CTTTGAAACC TTGCCCACGT TTGAAGTGCC TAAACCAGTG
CTTGATGCAG CGGTAAAAGC CAGTGCTATT GTGGGTAAAG GTTTATACGG TGTAGACATC
AAACAAGTCA ACAATCAGGT TTACGTGATT GAAGTGAATG ACAACCCAAG CTTAGAGTCG
AAAGTGGAAG ATTTGTACTT AGGTAAAGAG CTATACATGT TGGTGATGCA AGAATTCGCT
AACCGTCTTG AGTTACGAGG CAAATAA
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| Protein sequence | MFKTIVVVDN AEGFPELDAS VIDFAQYLAD YPKVGEPKTR IINLCDTDKY LSQGYYCSLL
AEARQHKVLP SVNTINDLSE SLTDQSNVLT PVPKYMSTDL YAHIDDELPQ EILVFFGWSQ
NERHKRIAKH VFERFPAPIL RLTFSRDEKG LSVQPKALGI REIDSNLWPL FAERLEHFTQ
KYWRSRSNKK RFRWDMAILV NPEEKTAPSD SKAIQNFVKA AEQVGINAEV ITAKQGPMIS
QFDALFIRET TAINHHTYQL ARKGEQEGLE VIDDATSILR CCNKVFLHDA FSYNKVPSPK
SRFVSNSSDQ TCELLEAEFN YPMVLKLPES SFSIGVFKVE NLVELKLKLV EMLRQSALVL
IQEFVYTDYD WRIGVLNGRA IYACRYFMAR NHWQIYNHSS KKHFSGDFET LPTFEVPKPV
LDAAVKASAI VGKGLYGVDI KQVNNQVYVI EVNDNPSLES KVEDLYLGKE LYMLVMQEFA
NRLELRGK
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