| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4119 |
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| Symbol | |
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| ID | 4175908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4953286 |
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| End bp | 4954302 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638057155 |
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| Product | ABC transporter related |
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| Protein accession | YP_663672 |
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| Protein GI | 109900417 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.430229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAGTA TTACATTAAA ACAAGTGACC AAAAGCTTCG ACGAAGTAAA TGTTATCAAA
CCACTGGATT TAGAAATCAG AGACGGCGAG TTTATTGTGT TTGTTGGGCC ATCAGGTTGT
GGTAAATCGA CGTTACTACG CATGATCGCA GGTTTAGAAG ACACCACCAG TGGCAATATC
GATATTGATG GTCAAGATGC TACAAGCACG CCCCCTGCTA AGCGTGGCCT AGCCATGGTG
TTTCAATCTT ATGCGTTATA CCCACACATG TCGGTTCGCA ACAACATCGC GTTTCCTTTA
AAACGCGCCA AAGTACCGCC TGCAGAAATC GAACAAAAGA TTGCCTCAGC GGCCAAAATA
TTAAATTTAG GTGATTACCT AGACCGTAAA CCAGGTCAAC TTTCCGGTGG TCAGCGCCAA
CGTGTGGCAA TTGGTCGCGC CATTGTGCGC CAGCCATCTG CATTCTTGTT TGATGAGCCA
TTATCAAACC TTGATGCTTC GTTACGAGTC AACATGCGTT TAGAAATTTC AGAGCTGCAT
AAAAGCCTGA AAACCACCAT GATTTACGTG ACCCATGATC AGGTTGAAGC CATGACTATG
GCTGACAGAA TTGCGGTATT TAATGCGGGT ATTATCGAAC AAGTCGGTAC GCCACTAGAG
CTTTATCAAC ATCCGGTGAA TCGTTTTGTG GCAGGCTTTA TTGGCTCACC AAAAATGAAT
TTTATTGAGT TGAAGCAAGC CAAGGAAGAC GGCGCAACAT GTTTAGGCGT TCGCCCTGAG
CACTTTCAGA TTACAGCAGA TGCCGGGATT TGGTCAGGTA AAGTCGGCGT TGTTGAACAC
TTAGGTTCGG AAACCTTCTT ACATGTGCAG GTTGATGGCG TAGGTACATT AACCGTTAAA
GCGAATGGAG ACTGCCCATT AAGCTATGGT GATGATATTT CACTTAGTGC CGATCAAAGC
AAGATACTGC GCTTCAATGA CCAAGGGATC ACCTTGCCAA ACAAGGGAAA TCAATAA
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| Protein sequence | MGSITLKQVT KSFDEVNVIK PLDLEIRDGE FIVFVGPSGC GKSTLLRMIA GLEDTTSGNI
DIDGQDATST PPAKRGLAMV FQSYALYPHM SVRNNIAFPL KRAKVPPAEI EQKIASAAKI
LNLGDYLDRK PGQLSGGQRQ RVAIGRAIVR QPSAFLFDEP LSNLDASLRV NMRLEISELH
KSLKTTMIYV THDQVEAMTM ADRIAVFNAG IIEQVGTPLE LYQHPVNRFV AGFIGSPKMN
FIELKQAKED GATCLGVRPE HFQITADAGI WSGKVGVVEH LGSETFLHVQ VDGVGTLTVK
ANGDCPLSYG DDISLSADQS KILRFNDQGI TLPNKGNQ
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