| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4079 |
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| Symbol | |
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| ID | 4175868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4902812 |
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| End bp | 4904986 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638057115 |
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| Product | DNA helicase II |
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| Protein accession | YP_663632 |
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| Protein GI | 109900377 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTAT CTCGACTCTT AGAACAACTC AATGATAAAC AACGTGATGC AGTAGCCTCG
CCTGCTGCTG ACATGCTTAT TCTGGCCGGC GCTGGCAGCG GTAAGACCCG AGTGTTGGTG
CATCGCATTG CTTGGTTAAT GGAAGTAGAA GGCATTGCCC CTTGGGGTAT TCTCGCCGTT
ACTTTTACCA ACAAGGCCGC TCGCGAAATG CGCGGGCGTA TCGAAGAGTT GCAAGGCAGT
GCACTAAGCA ATATGTGGAT AGGCACCTTT CACGGTATCG CTCACAGACT ATTGCGCACC
CATTACGCTG AAGCTAAGTT ACCCGAAAAC TTCCAAATAC TCGATTCAGA CGACCAATAT
CGCCTAGTGC GCCGTGTCAT CAAGAGTATG AACCTAGATG AAAAGCAATG GGCGCCGAAA
CACGTTCAGT GGTACATCAA TGGCAATAAA GACGAAGGCT TAAGACCTGA GCACATAGAT
ACTCACGGTG ACTATAATCA GAAAAAGTTA TGTGAAATTT ATCAGGTTTA CCAGCAAACC
TGCGAACGGG CTGGCCTGGT AGATTTCGCC GAGTTATTAC TACGCGCCCA TCAACTATGG
GTAGAAAATC CTGAGCTACT TAAACATTAT CAAACCCGCT TTCGCGCAGT GCTTGTGGAC
GAGTTTCAAG ACACTAACAA CATCCAATAC GCTTGGCTGC GCCTATTAGC CGCACCTACC
AACAATATGA TTATTGTTGG CGATGACGAC CAATCAATTT ACGGTTGGCG CGGGGCAAAT
GTGCAGAATA TTCAACACTT CTTGCGTGAT TACCCTCAAG CAAAAACCAT ACGCTTAGAG
CAGAACTATC GCTCCACGGG CAATATATTA AAAGCGGCCA ATGCCGTCAT CGATAATAAC
CAAGGCCGTT TAGGCAAAGA GTTATGGACC GACGGTGTAG ACGGCGAACC TATTTCTTTG
TATGCCGGTT TTAACGAGTT AGATGAAGCA CGCTTTGCGG TATCGCGCAT AAAAGACTGG
CAGACCCAAG GTTATGCCCT CAGCGATTGC GCTATTTTGT ATCGCAACAA CGCCCAATCA
CGCGTACTTG AAGAAGCGTT ATTGCAAGAG TCTGTGGCCT ATCGCATATA CGGTGGCTTG
CGATTTTTCG AGCGTCAGGA AATCCGTGAT GCTTTAGGTT ATCTGCGTAT TATCAACCAA
CAAATTGACG ATGCCGCATT TGAGCGCGTC GTGAATACCC CTACGCGTGG CATTGGTGAT
AAAACCTTGT CCCAGGTGCG TGAGCAAGCC AAAGAGCATG ACTTGTCTAT GTGGCAAGCA
AGCTTACAGC TACTGCGTGA AAAACGCTTG TCAGGCCGTG CGGCCAATGC GCTACAAGCC
TTTGTGGATT TAGTCTTAAA ACTGCAAAAA GACACCACGG ATTTACCCTT AGAGCAACAC
GCTGATCACG TCATCAAAAA TTCTGGTTTG TACGCCATGT ACAAAGCAGA GAAAGGCGAA
AAAGCCCAAG CACGTATCGA AAACTTAGAA GAGCTCGTTA CCGCGTGTAA GCAATTTGCG
CCCCCTGAAG AAGCTGAAAA CATGAGCCCC ATGTCAGCGT TTCTTGCCCA TGCTTCGCTT
GAAGCTGGTG ACGCCCAGGC CGATAAGCAT CAAGACGCCG TGCAGATGAT GACCATACAC
ACAGCCAAAG GGCTAGAATT CCCTATGGTA TTGTTAGTGG GTGTGGAAGA GGGCATGTTC
CCCAGCCAAA TGAGCAATGA CGAACCCGGC AAAATAGAGG AAGAGCGCCG CCTTTGCTAC
GTGGGCATGA CTCGCGCAAT GCAAAAACTC TATCTCACCT ACGCTGAAAG TCGTCGTGTT
TATGGCCAAG ACAAATACCA TACGCCATCT CGCTTTATCA AAGAAATACC CACAGAATTT
ATTGAAGAAG TTCGCCTTCG CACCAAAGCG ACAGTGTCAC GTCCGATGCA GAGTCGCTTT
CAGTCTTCTG CAAGTCATAC CGCGTTTGAC TCTACGGGCT TTAAACTCGG GGAGCGAGTG
ACTCATCGTA AATTCGGGGA AGGCACTGTA CTTAACTACG AAGGCAGTGG CGAGCACGCC
AGAGTGCAGG TGAATTTTGA TAATGTTGGC AGTAAATGGT TAGTGCTGTC ATTTGCAAAA
CTAGATAAAA TTTAA
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| Protein sequence | MDVSRLLEQL NDKQRDAVAS PAADMLILAG AGSGKTRVLV HRIAWLMEVE GIAPWGILAV
TFTNKAAREM RGRIEELQGS ALSNMWIGTF HGIAHRLLRT HYAEAKLPEN FQILDSDDQY
RLVRRVIKSM NLDEKQWAPK HVQWYINGNK DEGLRPEHID THGDYNQKKL CEIYQVYQQT
CERAGLVDFA ELLLRAHQLW VENPELLKHY QTRFRAVLVD EFQDTNNIQY AWLRLLAAPT
NNMIIVGDDD QSIYGWRGAN VQNIQHFLRD YPQAKTIRLE QNYRSTGNIL KAANAVIDNN
QGRLGKELWT DGVDGEPISL YAGFNELDEA RFAVSRIKDW QTQGYALSDC AILYRNNAQS
RVLEEALLQE SVAYRIYGGL RFFERQEIRD ALGYLRIINQ QIDDAAFERV VNTPTRGIGD
KTLSQVREQA KEHDLSMWQA SLQLLREKRL SGRAANALQA FVDLVLKLQK DTTDLPLEQH
ADHVIKNSGL YAMYKAEKGE KAQARIENLE ELVTACKQFA PPEEAENMSP MSAFLAHASL
EAGDAQADKH QDAVQMMTIH TAKGLEFPMV LLVGVEEGMF PSQMSNDEPG KIEEERRLCY
VGMTRAMQKL YLTYAESRRV YGQDKYHTPS RFIKEIPTEF IEEVRLRTKA TVSRPMQSRF
QSSASHTAFD STGFKLGERV THRKFGEGTV LNYEGSGEHA RVQVNFDNVG SKWLVLSFAK
LDKI
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