| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4055 |
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| Symbol | |
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| ID | 4175844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4877986 |
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| End bp | 4878888 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638057091 |
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| Product | putative acyltransferase |
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| Protein accession | YP_663608 |
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| Protein GI | 109900353 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0029965 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACGTTGT TGTTTGGCAA TTTGATGGGT GTTCTGTCGG TTATTTTGTA TTTTATCAAC
ACAGTATTTT GGGTTATTCC CATTGTATTA CTGTCATTTC TAAAGCTGAT CCCAATCAGA
ATATGGCGCA CTGGGCTCTC TTATCTGCTC GATGGCTGTG CCACATCTTG GATCACAATC
AACAATGTTA ACCAAAACAT ATTCAGTCGT ACCAAAGTCG AAGTGTCCGG TGTTGAAACC
CTTACTCGAA ATGATTGGTA CCTAGTCATA GCGAACCATC AGTCATGGGT GGATATTCTC
ATTCTGCAAA GGGTATTCAA CCGAAAAATC CCGTTTCTTA AATTCTTTTT GAAGCAAGAA
TTAATCTGGG TACCCTTTCT AGGGATTGCT TGGTGGGCGC TCGATTTCCC CTTTATGCGC
CGCTACACCA AATCATTTCT AGCGAAAAAC CCTCACCTTA AAGGGAAAGA TCTAGAAACC
ACACAAAAAG CCTGTGAAAA ATTTCGCACT AAGCCTGTCA GTATCATGAA CTTCGTTGAA
GGCACACGCT TCACCCCACA GAAATACCAG CGCCAGTCTC CCTCGTTTCA ACATTTATTG
AAGCCAAAAG CGGGTGGAAT GGCATTTGTG TTAAGCGCTA TGGGTAGCCA ACTACACAAA
TTGTTAGACG TCACTATTTA CTATCCCCAA GGCATCCCAA CGTTTTGGGA CTTTGTGAGC
GGCAAGGTTA AAACCATTAA GGTTCATGTT TCAGTTACCC CTATAAGCGA CTTATTGCAA
AGTGACGCGT TCGCACAAGA CTATTTTGAC AATCCCGCGC AACGCGTCAT ATTCCAGCGC
TGGCTTAACA GTGTGTGGAT AGAAAAAGAC AAACGAATCG AACAATTATC GACGGAGCAG
TAA
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| Protein sequence | MTLLFGNLMG VLSVILYFIN TVFWVIPIVL LSFLKLIPIR IWRTGLSYLL DGCATSWITI
NNVNQNIFSR TKVEVSGVET LTRNDWYLVI ANHQSWVDIL ILQRVFNRKI PFLKFFLKQE
LIWVPFLGIA WWALDFPFMR RYTKSFLAKN PHLKGKDLET TQKACEKFRT KPVSIMNFVE
GTRFTPQKYQ RQSPSFQHLL KPKAGGMAFV LSAMGSQLHK LLDVTIYYPQ GIPTFWDFVS
GKVKTIKVHV SVTPISDLLQ SDAFAQDYFD NPAQRVIFQR WLNSVWIEKD KRIEQLSTEQ
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