Gene Patl_4053 details

Gene Information

• Locus tag: Patl_4053
• ID: 4175842
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 4876561
• End bp: 4877115
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638057089
• Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding
• Protein accession: YP_663606
• Protein GI: 109900351
• COG category: [S] Function unknown
• COG ID: [COG5135] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000260604
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGCATC ATTCACCCTG GCACGCCATA TTTTATCAGT CGCTGTCAGC GCATGAAAAA 
ATACCAGCGA GTCGCTACTT ACAGCTTGCC ACGGTTGATA ACCAAGGCAA CCCACGTTGT 
CGTACCTTGG TTTTTAGAGG CTTAAACCAA GATAAAAATC AGTTGTATCT GCACACAGAT 
AATCGAAGCG AGAAAATGTC GCAACTTGAG ATACAAAAAC ATGTAGAAGC GTGTTGGTAC 
TTTAGCGAAA CCCGAGAACA GTTTCGCTTC AGCGGTCACA TAGAGTGTAT CGGCCAAAGC 
GAAAAGTCAG AAACGACGAG CGGTTCGCCA AAAGCCCAGC ATTTACGTCT TGCGCATTGG 
CAAAAGCTGA GTGACGCGCT ACGAGAAAGT TATGGGCCAA ACTATGATAT TGCCCAACCT 
GATGAGAATT TTGTTTTGCT GATCCTACAC ATCACCCGAG TGGATTATTT ACGCCTTGCT 
CCCCTGCCTC ACTTACGTGT TATTTACCAC CTAGACGCTA GCGAAAATTG GCAAGCAGAA 
GCTGCTGTAC CGTAA 

 

Protein sequence

MEHHSPWHAI FYQSLSAHEK IPASRYLQLA TVDNQGNPRC RTLVFRGLNQ DKNQLYLHTD 
NRSEKMSQLE IQKHVEACWY FSETREQFRF SGHIECIGQS EKSETTSGSP KAQHLRLAHW 
QKLSDALRES YGPNYDIAQP DENFVLLILH ITRVDYLRLA PLPHLRVIYH LDASENWQAE 
AAVP