Gene Patl_4040 details

Gene Information

• Locus tag: Patl_4040
• ID: 4175829
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 4865748
• End bp: 4866506
• Gene Length: 759 bp
• Protein Length: 252 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 638057076
• Product: hypothetical protein
• Protein accession: YP_663593
• Protein GI: 109900338

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAAT CACTCTGTGC TGGTGCACTG GTATTGGCCT TTTCAAGTTT TTCGAGCCAA 
GCCGACACTC TTTTAGGCGT ATATGCGGGA GCGCAAGCAT GGGATATGGA GACAACCGGT 
GGGTTTTCTG ATAGCAATAA TAACGTTGAT TTTAATTTTG AAGATGAAAC CAAGAGCAGC 
TTTTATGTTG CGCTTGAGCA CCCTGTGCCA TTCGTACCAA ATATTAAATT ACAACGTACA 
GGGCTAGATA CCAATGGGGA AACCGTGCTG TCCTCTAGCA TGACCTATGG TTCAGAGTTG 
TTTTCAGCGA ACACCACGGT CAATACTTCA CTTGATTTAA TCAGCACTGA TTACATTGCT 
TATTATGAGT TGTTTGATAA TGACCTAATA AGTTTTGACT TAGGTATCAA CGCTAAGCAT 
GTTGACGGCG ATATTTATGT AGAAGAACAA GGTGATGCAA CACAGAATGC CTCACAAGAC 
TTCTCTGGAT TTGTGCCAAT GCTTTATTCT CGCGTTGCTG TAGGTGTACC ATTTACAGGA 
TTGGGTGCAT ATGTAGAAGG AAGTTTTTTA GCGTTCGACG ATAACACCAT TTCAGATTAT 
CAAGCGGCGA TCACTTACGG TTTGCTCGAT AATATCGCTA TTGACGCTAC AGTACAGCTT 
GGCTATCGCC AGTTAAAGAT GGAATTAGAT GACTTAGACG GTATTTATAC CGACTTTGAA 
TTCAGCGGCG CGTTTGTTGG CGTTGAAGTA CATTTTTAA 

 

Protein sequence

MNKSLCAGAL VLAFSSFSSQ ADTLLGVYAG AQAWDMETTG GFSDSNNNVD FNFEDETKSS 
FYVALEHPVP FVPNIKLQRT GLDTNGETVL SSSMTYGSEL FSANTTVNTS LDLISTDYIA 
YYELFDNDLI SFDLGINAKH VDGDIYVEEQ GDATQNASQD FSGFVPMLYS RVAVGVPFTG 
LGAYVEGSFL AFDDNTISDY QAAITYGLLD NIAIDATVQL GYRQLKMELD DLDGIYTDFE 
FSGAFVGVEV HF