| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4039 |
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| Symbol | |
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| ID | 4175828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 4863784 |
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| End bp | 4865616 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638057075 |
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| Product | sulfite reductase (NADPH) flavoprotein, alpha chain |
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| Protein accession | YP_663592 |
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| Protein GI | 109900337 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
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| TIGRFAM ID | [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCAA ATACACAGCA AAATTTAGGT TCTACTACTG CATTAAGTGA TACCCAATGG
GCGCAGCTTA ATCAATTGAC GCCGTCACTC ACACCATCTC AGTTAGGTTG GTTAAGTGGT
TATCTGGCTG GGCTAGCTCA GACTCAGGTC GGTACAACGA TCCCTCAAGC AAACCCAGCA
GTTGGCGAGG CAGCGGGTGC GGATAAATTC ATTACCATTC TTTACGGCTC TCAAACGGGT
AACGCTAAGG CATTGGCCCA AGGCTACAAA GCCAAGCTCG ATGCAGCAGG CATTGCAGCC
AAGTTGGTCA ATATGGCTGA CTACAAAGCG AAACAACTGA AGAATGAATC ACATATCGTG
GTCATTGTTA GCACCCATGG TGAAGGGGAT GCGCCAGATG ATGCCATTGA GTTGCATGAT
TTTCTTTCAA GTAAAAAAGC CCCTAAATTA CCAAATTTGA GCTTCTCAGT TTTAGGCCTA
GGAGACAGCA GCTATGAGTT TTTCTGCCAG ACCGCCAAAG ACTTTGACAA AAAGCTTGAT
GAGTTAGGTG CCAAGCGTAT TGCCGATCGC GTTGACTGTG ATGTGGATTA CGATGACGCT
GCGCAAGCCT GGGGTGAACA AGTTTTAAAT AAAGTTCAAG ATGAGCTGAA AGCTAAAAGC
AATTCACATG TGGTAGCCAT GCCTCATGTT GGTAAGCCCA GCCTGTCAGT GGCCACGGCT
CAGTATTCTA AGAAAAACCC TTTTACAGCG AGTTTGTTAG AAAGCCAAAA AGTAACTGGC
CGTGATTCAG TCAAAGACAT CAGGCACATT GAAATTTCAC TTGAAGACTC AGGCATTCAA
TATCGCCCAG GTGATGCATT AGGTGTTTGG TTCAAAAATG ACCCTAGCAT GGTAGACGAG
TTGCTTAGCT TGCTTGGCGT TGAAGGTGAG GCGGAAGTTA CCTTAAGCGG TGAAGCTATT
GCCCTGCGTG ATGCACTGAT TGAAAAGCGT GAGTTAACCC AGAGCTATCC GTCATTTGTG
ACCGCGTATG CTGAGATTGC GAATAATCCT GAATTGAATG CCTTACTCGA AGACAAAGCA
GGCTTGCGGG CTTTCCTAGG CGAACGTCAA ATTATTGATA TTGTGCGCCA ATATCCAGCA
AAAGTAGATG CTCAAGCGTT AGTTGATATG CTGCGGGGTA TGACTCCGCG TCTCTATTCT
ATTGCTTCGA GCCAAGCTGA AGTAGAAGAC GAGGTGCATT TAACTGTGGC ATTAGTTGAA
TACGATGCAC ATGGCCAGAT TCATCAGGGC GGCGCGTCAA GTTACCTCGC TCAGCGCTTA
GAAGAGGGCG GTGAAGTACA AGTTTTTGTT GAAAAGAATG ACAACTTCCG TTTGCCTGAA
AGTTCAGATA CCCCTGTCAT CATGGTTGGG CCAGGCACCG GCATAGCCCC TTTTAGAGCA
TTTATGCAAG AACGTGAGGC GCAAGAAGCT GAGGGTAAAA ACTGGTTGTT CTTTGGCAAC
CCAAATTACA CCCAAGACTT TTTATATCAA ACAGAGTGGC AGCGTTTCGT AAAAGACGGC
GTGCTCAGTA AAGTCAGCTT GGCGTTTTCA CGCGATCAAG AAGATAAAAT ATATGTTCAG
CATCGATTAT TAGAGCAAGG CGCAGAAGTA TTTGCATGGC TTGAACAGGG TGCGCATTTT
TATGTGTGCG GTGATGCGAA TCATATGGCT AAAGACGTGC ATGCCGCACT GGTCGAAATC
GTACAAAAGC ACGGTGCTAA GAGTGCTGAA GCTGCCGAAG AATATTTAAC TGCATTGCGC
AGAGCAAAAC GTTATCAGAA GGACGTTTAT TAA
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| Protein sequence | MSSNTQQNLG STTALSDTQW AQLNQLTPSL TPSQLGWLSG YLAGLAQTQV GTTIPQANPA
VGEAAGADKF ITILYGSQTG NAKALAQGYK AKLDAAGIAA KLVNMADYKA KQLKNESHIV
VIVSTHGEGD APDDAIELHD FLSSKKAPKL PNLSFSVLGL GDSSYEFFCQ TAKDFDKKLD
ELGAKRIADR VDCDVDYDDA AQAWGEQVLN KVQDELKAKS NSHVVAMPHV GKPSLSVATA
QYSKKNPFTA SLLESQKVTG RDSVKDIRHI EISLEDSGIQ YRPGDALGVW FKNDPSMVDE
LLSLLGVEGE AEVTLSGEAI ALRDALIEKR ELTQSYPSFV TAYAEIANNP ELNALLEDKA
GLRAFLGERQ IIDIVRQYPA KVDAQALVDM LRGMTPRLYS IASSQAEVED EVHLTVALVE
YDAHGQIHQG GASSYLAQRL EEGGEVQVFV EKNDNFRLPE SSDTPVIMVG PGTGIAPFRA
FMQEREAQEA EGKNWLFFGN PNYTQDFLYQ TEWQRFVKDG VLSKVSLAFS RDQEDKIYVQ
HRLLEQGAEV FAWLEQGAHF YVCGDANHMA KDVHAALVEI VQKHGAKSAE AAEEYLTALR
RAKRYQKDVY
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