| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_4025 |
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| Symbol | |
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| ID | 4175814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 4848361 |
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| End bp | 4849488 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638057061 |
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| Product | alanine racemase |
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| Protein accession | YP_663578 |
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| Protein GI | 109900323 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACGCC CTATTTCGAT TACGGTAGAT CTGGATGCTA TCCGTCAAAA CTTCGCATAT
GCAAATGCTC TGGGTGTTAA CGCCTTGGAA AGTTCCATCA ACGACCGTCA GAGCAATACT
CTTGCGGTCA TCAAAGCTGA TGCTTACGGC CACGGCGCAG TAGCAACAGC GCGCGCTCTT
AATGGCCAAG CCGCTCTACT TGCGGTATCG AGTATTGAAG AAGCCGTAAG TTTGCGCCAA
CACCATATAA AGACGCCCAT TTTATTGCTT GAAGGCTGCT TTTGTCCTAG TGAATTGAGT
GTTGTAAATG AATTAAACCT ACAAATTGTT ATTCACAACC AAAAGCAAAT TGAAGATCTG
CTGGCCCAAG TATTAACGAA GCCCATAAAA GTATGGTTGA AAGTTGATAC TGGTATGCAT
CGCCTAGGCA TACCTGTCTC AGATGCATTG AAGGCTTATA CTCAACTCGC ATCCAGTAAG
AATGTGTGCT CGGTTATGCT TATGACGCAC TTTGCTACAT CTGATCACCC CGATCACCCT
TTACTGCTGA GTCAAATACA GTCAATACAA AAGCTTGCTG AAAAAGTATC GGCGGAGCCG
TCATACGCAG GTTGTAGCTT AGCCAATTCA GCTGCCCTAC TTGCTACACC GAAAAGCATC
AGCACTTGGA ACCGCCCAGG GATCATGCTG TATGGTATTA GTCCCTTCAA CCAAAGTGAT
ATCAACGTTC TACCACTCAT TCCGGCGATG ACTTTTAGCT CAAAAGTGAT TGCATTGAGA
CGCGTCGCAA CTGGCGAGTC AGTAGGGTAC GGCGCAATAT GGACAGCGAA GCGACCAAGC
ATTATCGCCA CTGTGGCGGC AGGTTATGGT GATGGTTACC CTCGAACGGC TAAATCTGGC
ACCCCTGTTA TGGTCAATGG CCAGATAGCG CCGTTAGCGG GTCGTGTTTC GATGGACATG
TTGTGCGTTG ACGTCACTCA ATTAACCGAT ATAAGTGAAG GCAGCCCAGT CGAGCTTTGG
GGCAAGAATA TACCGGTTAA TGACGTGGCC GCTTGGGCGG ATACGTTAGG CTATGAATTA
GTCACCCGAA TGCCAACGCG CGCCAAACGG GTATTTATTA ACGAGTAA
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| Protein sequence | MPRPISITVD LDAIRQNFAY ANALGVNALE SSINDRQSNT LAVIKADAYG HGAVATARAL
NGQAALLAVS SIEEAVSLRQ HHIKTPILLL EGCFCPSELS VVNELNLQIV IHNQKQIEDL
LAQVLTKPIK VWLKVDTGMH RLGIPVSDAL KAYTQLASSK NVCSVMLMTH FATSDHPDHP
LLLSQIQSIQ KLAEKVSAEP SYAGCSLANS AALLATPKSI STWNRPGIML YGISPFNQSD
INVLPLIPAM TFSSKVIALR RVATGESVGY GAIWTAKRPS IIATVAAGYG DGYPRTAKSG
TPVMVNGQIA PLAGRVSMDM LCVDVTQLTD ISEGSPVELW GKNIPVNDVA AWADTLGYEL
VTRMPTRAKR VFINE
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